| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_5310 |
|---|
| Symbol | |
|---|
| ID | 1186995 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004578 |
|---|
| Strand | + |
|---|
| Start bp | 6038783 |
|---|
| End bp | 6040159 |
|---|
| Gene Length | 1377 bp |
|---|
| Protein Length | 458 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637396629 |
|---|
| Product | glutamine synthetase |
|---|
| Protein accession | NP_795041 |
|---|
| Protein GI | 28872422 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0174] Glutamine synthetase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCGGTAC CCCCGCGTGC CGTTCAGCTT AACGAAGCGA ACGCGTTCCT TAAGGAACAT
CCTGAGGTTC TGTACGTTGA CCTTCTGATT GCAGATATGA ATGGTGTGGT GCGTGGCAAA
CGCATCGAGC GCACCAGCCT CCATAAGGTT TACGAGAAAG GCATCAACCT GCCGGCCTCT
TTATTTGCCC TGGATATCAA CGGCTCCACG GTGGAAAGCA CCGGTCTGGG CCTGGATATC
GGTGATGCTG ACCGAATCTG TTATCCCATC CCTGACACCC TGTGCAACGA GCCTTGGCAA
AAGCGCCCTA CCGCGCAACT GCTGATGACC ATGCACGAAA TCGAAGGTGA CCCGTTTTTC
GCCGACCCGC GCGAAGTCTT GCGCCAGGTA GTCGCCAAGT TCGATGAAAT GGGCCTGACC
ATCTGCGCCG CCTTCGAGCT GGAGTTCTAC CTGATCGATC AGGAGAACGT TAACGGCCGT
CCGCAACCGC CCCGCTCCCC TATCTCCGGC AAGCGCCCGC ACTCGACACA GGTCTACCTG
ATCGATGACC TCGACGAATA CGTCGATTGC CTGCAGGACA TTCTGGAAGG TGCGAAGGAG
CAAGGCATTC CTGCCGACGC CATCGTCAAG GAAAGTGCCC CTGCGCAGTT CGAAGTGAAC
CTGCACCACG TCGCAGACGC TATCAAAGCG TGCGACTACG CTGTGCTGCT CAAGCGCCTG
ATCAAGAACA TCGCCTACGA TCACGAAATG GACACGACCT TCATGGCCAA GCCCTATCCG
GGTCAGGCGG GTAATGGTCT GCACGTCCAC ATCTCGATTC TGGATCGCGA TGGCAAGAAC
ATCTTCACCA GCGAGGATCC CGAGCAGAAC GCCGCATTGC GTCACGCGAT CGGCGGTGTG
CTCGAGACCC TGCCTGCGCA GATGGCGTTC CTGTGCCCGA ACGTCAACTC GTACCGTCGC
TTTGGTGCTC AGTTTTACGT ACCAAACTCG CCCACCTGGG GCCTGGACAA CCGCACGGTC
GCGGTCCGCG TGCCAACCGG TTCGGCCGAT GCCGTGCGTA TCGAACACCG CGTAGCCGGT
GCCGATGCCA ACCCGTATCT GGTCATGGCT TCGGTGCTGG CAGGCGTGCA TCACGGTCTG
GTCAACAAGA TCGAGCCTGG CGCTCCGGTG GAAGGCAACT CGTACGAACA GCACGAACAA
AGCCTGCCGA ACAACCTGCG CGACGCACTG CGCGAGCTGG ACGACAACCC GGTCATGGCC
AAGTACATCG ATCCGAAATA CATCGACATC TTTGTCGCCT GTAAAGAGAG CGAGCTGGAA
GAGTTCGAAC ACTCGATCTC CGACCTTGAG TACAACTGGT ACCTGCATAC GGTCTGA
|
|---|
| Protein sequence | MSVPPRAVQL NEANAFLKEH PEVLYVDLLI ADMNGVVRGK RIERTSLHKV YEKGINLPAS
LFALDINGST VESTGLGLDI GDADRICYPI PDTLCNEPWQ KRPTAQLLMT MHEIEGDPFF
ADPREVLRQV VAKFDEMGLT ICAAFELEFY LIDQENVNGR PQPPRSPISG KRPHSTQVYL
IDDLDEYVDC LQDILEGAKE QGIPADAIVK ESAPAQFEVN LHHVADAIKA CDYAVLLKRL
IKNIAYDHEM DTTFMAKPYP GQAGNGLHVH ISILDRDGKN IFTSEDPEQN AALRHAIGGV
LETLPAQMAF LCPNVNSYRR FGAQFYVPNS PTWGLDNRTV AVRVPTGSAD AVRIEHRVAG
ADANPYLVMA SVLAGVHHGL VNKIEPGAPV EGNSYEQHEQ SLPNNLRDAL RELDDNPVMA
KYIDPKYIDI FVACKESELE EFEHSISDLE YNWYLHTV
|
|---|
| |