| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_5247 |
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| Symbol | |
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| ID | 1186932 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 5966030 |
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| End bp | 5966677 |
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| Gene Length | 648 bp |
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| Protein Length | 215 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637396566 |
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| Product | amino acid ABC transporter, permease protein |
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| Protein accession | NP_794978 |
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| Protein GI | 28872359 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATTTCA CTCTCTGGGA CATCCTGCGC AACCTGCTGA TCGGCCTGCA ATGGACCCTG
GCCCTGTCGC TGGTAGCCTT TATCGGCGGC GGTTTGATCG GCTTGCTGGT GATGGTCATG
CGCACGTCGG AAAAAACCGG CCCGCGCGTG GCCGCCAAGC TTTATATAGA ACTGTTTCAG
GGCACACCGC TGCTGATGCA GCTGTTTCTG GTGTTCTTCG GGGTTGCCCT GATGGGCATG
GACATTTCGC CGTGGGCTGC TGCGGCCCTG GCACTGACGC TGTTCACCAG CGCCTACCTC
GCCGAGATCT GGCGCGGCTG CGTGGAGTCG ATCTCCAAGG GCCAGTGGGA AGCTTCGGCC
AGCCTGGCGA TGACGCCACT GGAACAGATG CGCTACGTGA TCCTCCCTCA AGCGCTGCGC
ATCGCGGTTG CCCCGACGGT CGGCTTTTCC GTACAGGTGG TCAAAGGCAC AGCGGTAACT
TCGATCATCG GTTTTACCGA GCTGACCAAG ACCGGCAGCA TGCTGGCCAA CGCCACGTTC
GAACCTTTCA TGGTCTATGG CTTCGTTGCC CTGGGCTATT TCATCCTCTG CTACCCCTTG
TCGCTGTGCG CGCGCCATCT GGAAAGGAGA CTGCATGCCT CTGCTTAG
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| Protein sequence | MDFTLWDILR NLLIGLQWTL ALSLVAFIGG GLIGLLVMVM RTSEKTGPRV AAKLYIELFQ
GTPLLMQLFL VFFGVALMGM DISPWAAAAL ALTLFTSAYL AEIWRGCVES ISKGQWEASA
SLAMTPLEQM RYVILPQALR IAVAPTVGFS VQVVKGTAVT SIIGFTELTK TGSMLANATF
EPFMVYGFVA LGYFILCYPL SLCARHLERR LHASA
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