| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_5245 |
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| Symbol | |
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| ID | 1186930 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 5964550 |
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| End bp | 5965335 |
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| Gene Length | 786 bp |
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| Protein Length | 261 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637396564 |
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| Product | amino acid ABC transporter, periplasmic amino acid-binding protein |
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| Protein accession | NP_794976 |
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| Protein GI | 28872357 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACCAAGC GTTACAGCGC CCTGCTTACT GCCTTGTTTG CCAGTCTGAT GTTGAGTCAG
ACACCCGCCC ACGCCAACGG CCTGGACGAC GTTGTAGCGC GCGGCACCTT GAAGGTGGCC
GTTCCGCAGG ATTTCCCGCC CTTTGGCTCG GTCGGCCCGG ACATGAAGCC ACGCGGCCTG
GACATCGACA CAGCGCAATT GCTGGCCGAC AGGCTGAAGG TCAAGCTGGA ACTGACGCCG
GTCAACAGCA CCAACCGCAT TCCGTTTCTG ACCACCGGCA AGGTTGATCT GGTGATCTCA
AGCCTGGGCA AGAACCCGGA CCGCGAGAAA GTCATCGATT TCTCCCGCGC GTATGCACCG
TTCTACCTGG CTGTGTTCGG CCCGCCTGAT TCTCCGGTCA AGGACATCGC TGACCTGAAA
GGCAAGACCA TCAGTGTTAC CCGTGGCGCG ATCGAAGACA TCGAACTGTC GAAAGTTGCA
CCGGAAGGCG CAACCATCAA ACGTTTCGAG GACAACAATT CGACAATCGC CGCCTACCTG
GCCGGTCAGA CCGACCTGAT CGCCAGCGGT AACGTGGTGA TGGTCGCAAT CAGCGAGCGC
AACCCGAAGC GCATTCCAGC GCTGAAGGTG AAGCTCAAGG ATTCGCCTGT TTATGTCGGC
TTGAACAAAG GCCAGCCGGA ACTGCTGAGC AAGGTCAACG AGATCCTCAA CGCCGCCAAG
GCTGACGGTA CGCTGGAAAA AGCGTCCGTG ACCTGGCTGA AGGAACCGCT GCCCGCCGAT
CTCTGA
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| Protein sequence | MTKRYSALLT ALFASLMLSQ TPAHANGLDD VVARGTLKVA VPQDFPPFGS VGPDMKPRGL
DIDTAQLLAD RLKVKLELTP VNSTNRIPFL TTGKVDLVIS SLGKNPDREK VIDFSRAYAP
FYLAVFGPPD SPVKDIADLK GKTISVTRGA IEDIELSKVA PEGATIKRFE DNNSTIAAYL
AGQTDLIASG NVVMVAISER NPKRIPALKV KLKDSPVYVG LNKGQPELLS KVNEILNAAK
ADGTLEKASV TWLKEPLPAD L
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