Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_5233 |
Symbol | |
ID | 1186918 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 5954360 |
End bp | 5954632 |
Gene Length | 273 bp |
Protein Length | 90 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 637396552 |
Product | colicin/pyocin immunity family protein |
Protein accession | NP_794964 |
Protein GI | 28872345 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCTTTA AAGAAAAGCT AGAAGATTAC ACCGAAGAAG AATTCCTGGA ATTTTTGAGG GGACTCTCTT CTCAACATAT TCAACTTCAT GGTGATGAGT TTGTTAAGCA CATGGATCGT TTAGTTAAGC ACTTTGTAAA GGTGACAGAG CATCCAGCGC AAACAGACGT AATCTTTTAT CCCGAGGAAG GTCAGGAGGA CACCCCGGAG GGTATTTTAA AAACAATCAA AGAATGGCGA GCTGAAAATG GCAAGCCGGG ATTCAAACGC TAA
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Protein sequence | MIFKEKLEDY TEEEFLEFLR GLSSQHIQLH GDEFVKHMDR LVKHFVKVTE HPAQTDVIFY PEEGQEDTPE GILKTIKEWR AENGKPGFKR
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