Gene PSPTO_5233 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_5233 
Symbol 
ID1186918 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp5954360 
End bp5954632 
Gene Length273 bp 
Protein Length90 aa 
Translation table11 
GC content41% 
IMG OID637396552 
Productcolicin/pyocin immunity family protein 
Protein accessionNP_794964 
Protein GI28872345 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCTTTA AAGAAAAGCT AGAAGATTAC ACCGAAGAAG AATTCCTGGA ATTTTTGAGG 
GGACTCTCTT CTCAACATAT TCAACTTCAT GGTGATGAGT TTGTTAAGCA CATGGATCGT
TTAGTTAAGC ACTTTGTAAA GGTGACAGAG CATCCAGCGC AAACAGACGT AATCTTTTAT
CCCGAGGAAG GTCAGGAGGA CACCCCGGAG GGTATTTTAA AAACAATCAA AGAATGGCGA
GCTGAAAATG GCAAGCCGGG ATTCAAACGC TAA
 
Protein sequence
MIFKEKLEDY TEEEFLEFLR GLSSQHIQLH GDEFVKHMDR LVKHFVKVTE HPAQTDVIFY 
PEEGQEDTPE GILKTIKEWR AENGKPGFKR