Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_5209 |
Symbol | |
ID | 1186894 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 5928798 |
End bp | 5929976 |
Gene Length | 1179 bp |
Protein Length | 392 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637396528 |
Product | hypothetical protein |
Protein accession | NP_794940 |
Protein GI | 28872321 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAAGGCCA ACGCTGGAGG CTCCGCCGGA ACCGGAACCA ATACCTGCAC CTTACAAGCG GGGCTGTACT CAAGCAAAAA GCACCCGCGA CATCACCCTA CGGAGTGGAA GGATAAGGCA GACTCTGCCA AGTGGAGCAA GTTGGATAAA CTGCTGAAAC CGTCTCCGAA GATGTTGAAG CATGAGAAAG AACGCATTGA TAAATATGTA TTTTGGGATG AGTTGTCAGG GAAAGCTAAG ATGACCTCAA GTTTAATATG GCATTTTCAT CCGGTAGAAT TCATTTCAAC ATTTAGCGCT AAAAAAGTCT GCGCTTGCAA CGCCATAGTT AAGGCTACTC GCTGGGTTTC TTCCAGTAAG ACGCACTATG GCCCATTGCA TACGGGTGAT AAAGAGCTTG GGAGTGCACC TCAGTGGGAT GACCTGGTCT CAGAAGGGAA AATAACGGAA GAGGAGAAAA AAATTATTGT TGTAATGTCT GGAAACGAGG CAAAAATTAA CGGAGTACAA AGTTATGATA GCGAAATAAT TACTGCCGGC GCGATGCAGA AAACAATTAA TTTGTCCGGT GGCGGTGAGC TGCCACTACA AGTTAAGAAG TTCAAAAATC AGCATCCCGA GGCGTACATC GAATACTTTG ATTCTCAAGG CTGGAAGTTG GATGAGACAG GTGATTCGGC GAAAATGTAT TATCAAGGGC CGGCTCGAGC TAGTGGCGCA AAGCTGGAAG GAAAGGCGCT GAAGGATAAT TTAAAAATTG GTTGCAGTGA ATCGACATTT GGGAAGGTGG TTGACTGTCA GCCTGTTTCA GTGATGGCCT GCGCTATCGC AAGTCCGCTA TATATCCAGA TACAAATAAT GGATTTTATA GAAAGGTTGC GTAGTTCTTT AACGAAGAAG CCCACAGGCT ATAACTTTAC TGCTGGGGGA TTTTTCAAGA CCTCTCTCGG AAAAGCTGTG GTTTTGGACC ACGATATAAA TCGACCCGGG TATGTGAAGG ATGATTTGGG ATCTGCTCTT GACACTTTTT TTGCTCAAAA TCCAACAGTC AGCCGGAATG TTGATACATG GGGCTCAGCA TATAACGTTA ATGAGCGAAA AGTTTTAGAC CTGTATGGCG CTCGAAGAAG AATGACCAAT GCATTGCTTC GATACAATCA CTTGAAGGCG GAGTTATAA
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Protein sequence | MKANAGGSAG TGTNTCTLQA GLYSSKKHPR HHPTEWKDKA DSAKWSKLDK LLKPSPKMLK HEKERIDKYV FWDELSGKAK MTSSLIWHFH PVEFISTFSA KKVCACNAIV KATRWVSSSK THYGPLHTGD KELGSAPQWD DLVSEGKITE EEKKIIVVMS GNEAKINGVQ SYDSEIITAG AMQKTINLSG GGELPLQVKK FKNQHPEAYI EYFDSQGWKL DETGDSAKMY YQGPARASGA KLEGKALKDN LKIGCSESTF GKVVDCQPVS VMACAIASPL YIQIQIMDFI ERLRSSLTKK PTGYNFTAGG FFKTSLGKAV VLDHDINRPG YVKDDLGSAL DTFFAQNPTV SRNVDTWGSA YNVNERKVLD LYGARRRMTN ALLRYNHLKA EL
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