Gene PSPTO_5209 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_5209 
Symbol 
ID1186894 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp5928798 
End bp5929976 
Gene Length1179 bp 
Protein Length392 aa 
Translation table11 
GC content45% 
IMG OID637396528 
Producthypothetical protein 
Protein accessionNP_794940 
Protein GI28872321 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAGGCCA ACGCTGGAGG CTCCGCCGGA ACCGGAACCA ATACCTGCAC CTTACAAGCG 
GGGCTGTACT CAAGCAAAAA GCACCCGCGA CATCACCCTA CGGAGTGGAA GGATAAGGCA
GACTCTGCCA AGTGGAGCAA GTTGGATAAA CTGCTGAAAC CGTCTCCGAA GATGTTGAAG
CATGAGAAAG AACGCATTGA TAAATATGTA TTTTGGGATG AGTTGTCAGG GAAAGCTAAG
ATGACCTCAA GTTTAATATG GCATTTTCAT CCGGTAGAAT TCATTTCAAC ATTTAGCGCT
AAAAAAGTCT GCGCTTGCAA CGCCATAGTT AAGGCTACTC GCTGGGTTTC TTCCAGTAAG
ACGCACTATG GCCCATTGCA TACGGGTGAT AAAGAGCTTG GGAGTGCACC TCAGTGGGAT
GACCTGGTCT CAGAAGGGAA AATAACGGAA GAGGAGAAAA AAATTATTGT TGTAATGTCT
GGAAACGAGG CAAAAATTAA CGGAGTACAA AGTTATGATA GCGAAATAAT TACTGCCGGC
GCGATGCAGA AAACAATTAA TTTGTCCGGT GGCGGTGAGC TGCCACTACA AGTTAAGAAG
TTCAAAAATC AGCATCCCGA GGCGTACATC GAATACTTTG ATTCTCAAGG CTGGAAGTTG
GATGAGACAG GTGATTCGGC GAAAATGTAT TATCAAGGGC CGGCTCGAGC TAGTGGCGCA
AAGCTGGAAG GAAAGGCGCT GAAGGATAAT TTAAAAATTG GTTGCAGTGA ATCGACATTT
GGGAAGGTGG TTGACTGTCA GCCTGTTTCA GTGATGGCCT GCGCTATCGC AAGTCCGCTA
TATATCCAGA TACAAATAAT GGATTTTATA GAAAGGTTGC GTAGTTCTTT AACGAAGAAG
CCCACAGGCT ATAACTTTAC TGCTGGGGGA TTTTTCAAGA CCTCTCTCGG AAAAGCTGTG
GTTTTGGACC ACGATATAAA TCGACCCGGG TATGTGAAGG ATGATTTGGG ATCTGCTCTT
GACACTTTTT TTGCTCAAAA TCCAACAGTC AGCCGGAATG TTGATACATG GGGCTCAGCA
TATAACGTTA ATGAGCGAAA AGTTTTAGAC CTGTATGGCG CTCGAAGAAG AATGACCAAT
GCATTGCTTC GATACAATCA CTTGAAGGCG GAGTTATAA
 
Protein sequence
MKANAGGSAG TGTNTCTLQA GLYSSKKHPR HHPTEWKDKA DSAKWSKLDK LLKPSPKMLK 
HEKERIDKYV FWDELSGKAK MTSSLIWHFH PVEFISTFSA KKVCACNAIV KATRWVSSSK
THYGPLHTGD KELGSAPQWD DLVSEGKITE EEKKIIVVMS GNEAKINGVQ SYDSEIITAG
AMQKTINLSG GGELPLQVKK FKNQHPEAYI EYFDSQGWKL DETGDSAKMY YQGPARASGA
KLEGKALKDN LKIGCSESTF GKVVDCQPVS VMACAIASPL YIQIQIMDFI ERLRSSLTKK
PTGYNFTAGG FFKTSLGKAV VLDHDINRPG YVKDDLGSAL DTFFAQNPTV SRNVDTWGSA
YNVNERKVLD LYGARRRMTN ALLRYNHLKA EL