| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_5196 |
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| Symbol | |
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| ID | 1186881 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 5914876 |
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| End bp | 5915742 |
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| Gene Length | 867 bp |
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| Protein Length | 288 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637396515 |
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| Product | ABC transporter, permease protein |
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| Protein accession | NP_794927 |
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| Protein GI | 28872308 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCTTG CACCTCCCGC TCGCGAAGAA TACGAAGTCA CGCTGGAGCC TTTCACTCAG
GAAGACCTGG CCCGCGACCT GCCGCTCGCG CAGCGCATCT GGCAGCTGAG CTGGGTGCGC
AAAAGCGTGA TCATGATCGC CCTGGCCGTG ATCTGGGAGC TGGCCGCACG CCTGCAGAAC
AACGACCTGC TGTTACCCAG CTTTCTGCAA ACGGCCGCCG CTTTTTATGA CGGGCTGATT
TCCGGCGAGC TGCCAGGCAA GGTATGGATT TCCCTGACCG TGCTGATTCA GGGCTACCTG
ATCGGCATCG TGCTGGCGTT TGCCCTGACC ACGCTGGCCG TGTCCACCCA ATTGGGCCGC
GACCTGCTCA GCACGCTGAC CGCCATGTTC AATCCGCTGC CGGCCATTGC CCTGCTGCCT
TTGGCGCTGC TGTGGTTCGG GCTGGGGCAG AACAGCCTGA TATTCGTGCT GGTGCATTCT
GTGCTGTGGG CGCTGGCGCT CAATACCTAC GCAGGCTTTC TCGGTGTTTC GGAAACCCAG
CGCATGGCCG GGCGCAACTA TGGCCTCAAG GGGTTGCGCT TTGTCTGGCA CATCCTGATT
CCCGCTGCGC TGCCGTCGAT TCTCGCAGGT CTGAAAATCG GCTGGGCCTT TGCCTGGCGC
ACTCTGATCG CCGCCGAACT GGTCTTCGGC GCATCATCCG GCAAGGGCGG TCTGGGTTGG
TACATCTTCC AGAATCGTAA CGAGCTGTAT ACCGACAAAG TCTTCGCAGG CCTGGCAGCG
GTGATCCTCA TCGGCTTGCT GGTGGAAAAC CTGCTGTTCG CCAACATCGA GCGCCTGACC
GTCAAGCGCT GGGGCATGCA GCGTTAA
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| Protein sequence | MSLAPPAREE YEVTLEPFTQ EDLARDLPLA QRIWQLSWVR KSVIMIALAV IWELAARLQN
NDLLLPSFLQ TAAAFYDGLI SGELPGKVWI SLTVLIQGYL IGIVLAFALT TLAVSTQLGR
DLLSTLTAMF NPLPAIALLP LALLWFGLGQ NSLIFVLVHS VLWALALNTY AGFLGVSETQ
RMAGRNYGLK GLRFVWHILI PAALPSILAG LKIGWAFAWR TLIAAELVFG ASSGKGGLGW
YIFQNRNELY TDKVFAGLAA VILIGLLVEN LLFANIERLT VKRWGMQR
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