Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_5154 |
Symbol | hisE |
ID | 1186839 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 5864472 |
End bp | 5864804 |
Gene Length | 333 bp |
Protein Length | 110 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637396473 |
Product | phosphoribosyl-ATP pyrophosphatase |
Protein accession | NP_794885 |
Protein GI | 28872266 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0140] Phosphoribosyl-ATP pyrophosphohydrolase |
TIGRFAM ID | [TIGR03188] phosphoribosyl-ATP pyrophosphohydrolase |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTGATA CGTTGTCCCG CCTGGCCGAG GTGCTGGAAT CACGCAAGGA TGCAGCTGCC GACAGCTCCT ACGTCGCCAG TCTGTACCAC AAGGGCTTGA ACAAGATTCT GGAAAAGCTC GGCGAAGAGT CGATCGAGAC CATCATTGCC GCCAAGGACG CAGCGGTCAG CGGTGATTGC AGCGATGTGA TCTATGAAAC CGCCGACCTG TGGTTTCACA GCATGGTGAT GCTCGCCGCG TTAGGTCAGC ATCCGCAGGC GGTGCTCGAT GAACTGGACC GCCGTTTCGG CTTGTCCGGT CACACCGAAA AAGCTGCTCG CACGGCAGAA TAG
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Protein sequence | MTDTLSRLAE VLESRKDAAA DSSYVASLYH KGLNKILEKL GEESIETIIA AKDAAVSGDC SDVIYETADL WFHSMVMLAA LGQHPQAVLD ELDRRFGLSG HTEKAARTAE
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