| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_5110 |
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| Symbol | |
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| ID | 1186795 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 5809899 |
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| End bp | 5811125 |
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| Gene Length | 1227 bp |
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| Protein Length | 408 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637396430 |
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| Product | 3-oxoacyl-(acyl-carrier-protein) synthase II, putative |
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| Protein accession | NP_794842 |
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| Protein GI | 28872223 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0304] 3-oxoacyl-(acyl-carrier-protein) synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.120927 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCGTG TGGTGGTTAC CGGCATGTCC GGCATTACCT CGGTGGGCAG CGACTGGGCC
ACCATCAATG CGAGCTTCAC GGCAAACCGT AGTGGTATTC GGCGGATGGA CGAGTGGGAC
CGTTTCATCG AGCTGAACAC CCGGCTGGCG GGGCCCATCG ATGATTTCGC CGTGCCCGCG
CACTGGACGC GCAAGCAATT GCGCAGCATG GGCCGTGTAT CGCGGCTGGC GGTCGGGGCT
GGAGAACAGG CGCTGATCGA CGCCGGGCTG CTGAATGATC CGATCATTCG TGACGGCCGC
ATGGGCACTG CCTGCGGCTC GTCCACCGGC AGTACCGACG AGATCAAGGC GTTCGGCAAC
ATGCTGATCA ACTCGGTGGC GCTGAACCTC AACGCCAACT CGTACGTGCG GATGATGCCG
CACACGACGG CGGCTAACCT CAGTATCTTC TTCGGCCTGA CCGGACGCTT AATCCCGACG
TCCAGCGCTT GCACCAGTGG CAGTCAGGGT ATCGGGTACG CCTACGAGGC GATCAAGTTC
GGGCGTCTGC CGCTGATGCT CGCGGGCGGC GCCGAAGAAC TGTGCCCGAC CGAAGCGATG
GTCTTTGATG CTCTGTATGC AACCAGCCTG AAAAACGACG CACCGCACAC CACGCCACGG
CCCTACGACA GCGGACGCGA CGGGCTGGTG ATCGGCGAAG GCGGCGGCAT GCTGGTGCTC
GAAGAACTTG AACACGCCCA GGCGCGTGGC GCGCACATCT ATGCCGAGAT CGTCGGCTTT
GGCAGCAACG CCGACGGCGC GCACAGCACT CGCCCGGAAC AGGCCACCAT GCGCCGCGCG
ATGGAACTGG CGCTGGAAGA CGCCGGTTTG CCTCCCGAAG CCATCGGCTA CGTCAACGGC
CACGGCACGG CTACGGAACA AGGCGACATC GCCGAAACCC TCGCCACCAG CAGCCTGTTC
GGCCCACGCA TGCCGCTCAG CTCACAAAAA AGTTTCCTTG GTCACACATT GGGTGCCTGC
GGCGCACTGG AGTCGTGGTT CAGCATCGAA ATGCTCAACA GTGATCGCTA CATCCACACG
CTGAACCTGG TCGATGTAGA CCCACACTGC GGCGAACTGG ACTACATCCT CGGCGAACCC
CGGCAGATGA GCAATGAATA CGTGATGAAC AACAACTTTG CCTTTGGCGG GGTGAATACC
TCCCTGATCT TCAAGCGTTG GGGTTAA
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| Protein sequence | MKRVVVTGMS GITSVGSDWA TINASFTANR SGIRRMDEWD RFIELNTRLA GPIDDFAVPA
HWTRKQLRSM GRVSRLAVGA GEQALIDAGL LNDPIIRDGR MGTACGSSTG STDEIKAFGN
MLINSVALNL NANSYVRMMP HTTAANLSIF FGLTGRLIPT SSACTSGSQG IGYAYEAIKF
GRLPLMLAGG AEELCPTEAM VFDALYATSL KNDAPHTTPR PYDSGRDGLV IGEGGGMLVL
EELEHAQARG AHIYAEIVGF GSNADGAHST RPEQATMRRA MELALEDAGL PPEAIGYVNG
HGTATEQGDI AETLATSSLF GPRMPLSSQK SFLGHTLGAC GALESWFSIE MLNSDRYIHT
LNLVDVDPHC GELDYILGEP RQMSNEYVMN NNFAFGGVNT SLIFKRWG
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