Gene PSPTO_5053 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_5053 
Symbol 
ID1186738 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp5751962 
End bp5752285 
Gene Length324 bp 
Protein Length107 aa 
Translation table11 
GC content62% 
IMG OID637396374 
Producthypothetical protein 
Protein accessionNP_794786 
Protein GI28872167 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATTTCG TACTCGACCT GCTCGCCACC GTTTCGCGCT GGAGTCGCAG CAATCTTTCG 
GAAATCGCCC TCGCACTGGT GGGCTGCCTG CTGGTGCTGT TCGGCTCGGA CATCAAAGGC
TGGCTGGAGC AACGCATCAG CGGCATCACA GGCGCCCTGC GCATCCCGCT CATCGCCCTG
CTCTGCGCCG TCGGCAGCGG CGCAGCACTG ATCTACGCCA CCCCATGGGT GGTGCGCGGT
CTCAACCAGT TCAACAACTA CAGCCTGGCA CCGGTGCTGT TGGTAGTGCT GGTATTGATC
GGGGTGATTG CTGACCGCAA GTGA
 
Protein sequence
MDFVLDLLAT VSRWSRSNLS EIALALVGCL LVLFGSDIKG WLEQRISGIT GALRIPLIAL 
LCAVGSGAAL IYATPWVVRG LNQFNNYSLA PVLLVVLVLI GVIADRK