| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_5046 |
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| Symbol | |
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| ID | 1186731 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 5745884 |
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| End bp | 5746570 |
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| Gene Length | 687 bp |
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| Protein Length | 228 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637396367 |
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| Product | hypothetical protein |
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| Protein accession | NP_794779 |
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| Protein GI | 28872160 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0325] Predicted enzyme with a TIM-barrel fold |
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| TIGRFAM ID | [TIGR00044] pyridoxal phosphate enzyme, YggS family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.166269 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCCACGA TAGCAGCGAA CATTTCAACG CTCGAACAGC GAATTCGCGA CGCAGCCCTC
GCGGCCAAAC GTGATCCGGC GTCCGTAGGC CTGCTGGCGG TGAGTAAAAC CAAGCCTGCC
GGCGACCTGC GTGAAGCTTA CACCGCAGGC TTGCGTGACT TTGGCGAAAA TTATTTACAG
GAAGCACTGG GCAAACAGCT CGAACTGGCC GACCTGCCCT TGTGCTGGCA CTTCATCGGC
CCCATTCAGT CGAACAAGAC GCGCGCTATC GCCGAGAACT TCGCCTGGGT ACATTCCGTG
GATCGCCTGA AAATTGCTCA ACGCCTGTCC GAGCAGCGCC CCGAAGGCCT TGAGCCGCTA
AACATCTGCA TTCAAGTGAA CGTCAGCGGT GAAGCCAGCA AGTCCGGCTG TGCGCCTCAA
GACCTGCCAG CACTGGCCGC CGCCATCAAC GCCCTGCCAC GATTGAAGCT GCGTGGCCTG
ATGGCCATTC CCGAGCCGAC GGACGACCCA GCGGCTCAGG CGGCCTCTTT CGCCGCCGTG
CGTACCTTGC AGGAGCAGTT GAACCTGTCA CTCGACACAC TTTCCATGGG CATGAGCCAC
GACCTGGAAG CCGCCATTGC ACAAGGCGCA ACCTGGGTGC GGATCGGCAC GGCTCTTTTT
GGCGCCCGCG ACTATGGGCA GCCATGA
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| Protein sequence | MSTIAANIST LEQRIRDAAL AAKRDPASVG LLAVSKTKPA GDLREAYTAG LRDFGENYLQ
EALGKQLELA DLPLCWHFIG PIQSNKTRAI AENFAWVHSV DRLKIAQRLS EQRPEGLEPL
NICIQVNVSG EASKSGCAPQ DLPALAAAIN ALPRLKLRGL MAIPEPTDDP AAQAASFAAV
RTLQEQLNLS LDTLSMGMSH DLEAAIAQGA TWVRIGTALF GARDYGQP
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