| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4998 |
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| Symbol | |
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| ID | 1186683 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 5677702 |
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| End bp | 5678463 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637396319 |
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| Product | lipopolysaccharide biosynthesis protein, putative |
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| Protein accession | NP_794731 |
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| Protein GI | 28872112 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGCGTTT TTATTGCCAG TGCCGATCAG CCTTTGCTGA TGCGTCACGA CCTGGCTGAT
TTTGAATCGC TTTGGAATAT CCGGCTCGAT GCAGTCGATG AGCCCAACAC CGGTCGAGGT
GGCTGGAGCA GTGTGTTTCG CCTTGATCTG GACGGCCAGG GTTTCTACCT CAAGCGCCAG
AGCAATTACC TGACGCACAC GTTGCATCAC CCGTTTGGCG AGCCTTCGTT TTCGCGTGAG
TTTCGTAATA TCAGCCGCTA CCGCAAGCTG GGTATTCCGG CGCTGCAAGC GGTGTTTTAC
GGCGAGCGCA AGGTCGACGG TGAGCGCCGT GCAATCCTGA TGACCCGCGC GCTGGATGGC
TGGACCGATC TCGATGAGCT GTTGCAGCAA TGGAGCGCGC TGGCCTCGGA GCAGCGTTCG
GGGATACTTC AGGCCTGTGG TCTTCTTGCA CGTACGCTGC ATGGTGCGGG GCAGGTGCAC
GGCTGCTTCT ACCCCAAGCA TATTTTTCTT CAGGCGGTTG GCGCGGGCTA TCAGGCGCAG
TTGATCGATC TTGAGAAAAC GCGCCCGGTG ATCTTCGGCA AGCGTGACCT GGCCAGGGAT
CTGGAGCCGC TGCTGCGGCG TGCCCAGGTA TGGAATGACG CCGAGCGGCG CGAGCTGTTG
GCGGCTTACC TGCAAGCCAC GCCCGACAGC CTGCTGGTCG ACGCCTGGAG CGGGCGTCTG
GGCAAGCGCA GCGCTCACAA ACGTGACCTT CAACACCGAT GA
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| Protein sequence | MSVFIASADQ PLLMRHDLAD FESLWNIRLD AVDEPNTGRG GWSSVFRLDL DGQGFYLKRQ
SNYLTHTLHH PFGEPSFSRE FRNISRYRKL GIPALQAVFY GERKVDGERR AILMTRALDG
WTDLDELLQQ WSALASEQRS GILQACGLLA RTLHGAGQVH GCFYPKHIFL QAVGAGYQAQ
LIDLEKTRPV IFGKRDLARD LEPLLRRAQV WNDAERRELL AAYLQATPDS LLVDAWSGRL
GKRSAHKRDL QHR
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