Gene PSPTO_4987 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_4987 
Symbol 
ID1186672 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand- 
Start bp5660750 
End bp5661487 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content56% 
IMG OID637396308 
Producthypothetical protein 
Protein accessionNP_794720 
Protein GI28872101 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.613589 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGTCACCA GTTGTGGTCG ATTCGACTTG TTGAAGCGCA CCCTGGAAAC GTTCGACCGT 
TTCAACACTG CGCCCATACG CCACGTGCTG ATTACCGAAG ACTCGGGCGA TGCTCAGGTC 
GAGACCTGCA TTCCCGAGCA CTGGCGCGCG CACACGCGTT TCATCATCAA CAACCCCAAA 
CTGGGGCAGA TGCGTTCTGT CGATGCGGCG TATTCACTGA TCGAGACGTC CTGGGTTTTC 
CATTGCGAAG ATGACTGGGA TTTCTACCGT CCGCACTTCA TCGAAGAATC GATGACCCTG 
CTGAAGCACG ACCCGCAGGC GTTGCAGGTC TGGTTGCGCA GTTACAATCA TGATCTGTGT 
GTGCATAGCC CCTATGTCTA TCTCAACGAG CGGGAAGTGG TTGAGGGCAT CGCGTTTTAC 
AAGCTGGGTT CGCACAAGCC GGAGTGGCAG GGTTTTTCGT TCAATCCGGG GCTGCGTCGT 
CTGGCGGATT ACCAGCAGCA TGCGCCTTAT GCAGGGCATG GCGGGGAGAA GAAACTTTCA 
CAATTATTCG CCGCGCAAAA CCGTTACGCT CTGATTCTGG AAAATGATGC CGTCTTGCAT 
ACCGGTTTCG GTGAGCATGT GGTGGTGCCG CAGGAGCGGC TGGATAAACA GCGCCGCAAG 
CGTCGGGATC GCCTCAAGCT GATCGTCGCT GTGCTCGTTG CCTTTGTAGC AGGCTGGTTG 
CTCAATAATG TCAGTTGA
 
Protein sequence
MVTSCGRFDL LKRTLETFDR FNTAPIRHVL ITEDSGDAQV ETCIPEHWRA HTRFIINNPK 
LGQMRSVDAA YSLIETSWVF HCEDDWDFYR PHFIEESMTL LKHDPQALQV WLRSYNHDLC 
VHSPYVYLNE REVVEGIAFY KLGSHKPEWQ GFSFNPGLRR LADYQQHAPY AGHGGEKKLS 
QLFAAQNRYA LILENDAVLH TGFGEHVVVP QERLDKQRRK RRDRLKLIVA VLVAFVAGWL 
LNNVS