Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_4875 |
Symbol | cobI |
ID | 1186558 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 5522599 |
End bp | 5523330 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637396195 |
Product | precorrin-2 C20-methyltransferase |
Protein accession | NP_794609 |
Protein GI | 28871990 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG2243] Precorrin-2 methylase |
TIGRFAM ID | [TIGR01467] precorrin-2 C20-methyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGGCGC GCGGTCGATT GATTGGCCTG GGCGTCGGTC CCGGCGACCC GGAACTGATT ACCGTCAAAG CCTTGCGCCT GCTGCGTGAG TCGCCGGTGG TGGCGTACTT CGTGGCCAAG GGCAAAAAGG GCAACGCGTT CGGCATCATC GAAGCGCACC TGCAGGACGT TCAGACCTTG ATGCCGCTGA TCTACCCGGT CACCACCGAG GCATTGCCAG CGCCGTTGTC GTACGAGAAA GTCATCAGTG ATTTCTACGA CGCGTCCAGC CTTCAAGTGG CTGCGCATCT GGATGCCGGG CGTGATGTGG CGGTGATCTG CGAAGGCGAC CCGTTCTTCT ACGGCTCTTA CATGTACCTG CACGACCGCC TGGCCGAGCG CTACGAGGCT GAAGTGATTC CGGGTGTGTG CTCGATGCTC GGTGGCGCGT CGGTACTGGG CGCGCCGTTG GTGTATCGCA ACCAGAGCCT GTCGGTGCTG TCCGGTGTGC TGTCCCATGA CGATCTGAAA CGCAAGCTGG CCGATGCCGA TGCTGCGGTG ATCATGAAAC TGGGTCGCAA CTTCCACAAG GTCCGCGAAG TGCTGACCGA GCTGGGCATG GCCGGGCGTG CGCTGTATGT CGAGCGCGCG ACCATGAGCA ACCAGAAAAT AGTGCCGCTG GATCAGGTCG ATCCAATGTC TTCGCCGTAC TTTTCGCTGA TTATCGTTCC TGGTGACAGG TGGCAAGGCT GA
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Protein sequence | MQARGRLIGL GVGPGDPELI TVKALRLLRE SPVVAYFVAK GKKGNAFGII EAHLQDVQTL MPLIYPVTTE ALPAPLSYEK VISDFYDASS LQVAAHLDAG RDVAVICEGD PFFYGSYMYL HDRLAERYEA EVIPGVCSML GGASVLGAPL VYRNQSLSVL SGVLSHDDLK RKLADADAAV IMKLGRNFHK VREVLTELGM AGRALYVERA TMSNQKIVPL DQVDPMSSPY FSLIIVPGDR WQG
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