Gene PSPTO_4813 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_4813 
Symbol 
ID1186496 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand+ 
Start bp5452570 
End bp5453175 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content61% 
IMG OID637396133 
Productlipoprotein, putative 
Protein accessionNP_794547 
Protein GI28871928 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2980] Rare lipoprotein B 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCAAAC GCAATTTGCT GGTGATGGGC CTGGCTGTTC TGTTGAGTGC CTGTGGCTTC 
CAGCTGCGTG GCACCGGCAC GACCGAGTTG GCGATCAAGG AGCTGGATGT CAGCGCACGC 
AACGCTTACG GCGAAACCGT CACTCAGCTG ACTCGCCTGT TGACCAGCTC CGGCGTCAAG 
GTCTACACCG GCGCGCCCTA CAAGCTGATT CTGACCAGTG AGAACGAAAC CCAGCGCACC 
ATCAGCTTCT CCGGTTCGGG CCGCTCGGCG GAATACCAGC TGACCAACAC GCTGACGTAT 
GAAATTCACG GTGACCGGGA CCGCCTCCTG CTGGACAACA AGGTCAGCGC AGACCGCTCC 
TACGTACATG ACGGCAACAA CCTGACCGGC TCCGATCAGG AAGCCTCGCA GGTCCGTCAG 
GAAATGCGCA ACGACCTTAT CCAGAAACTG ATGGCACGCC TGCAACAACT GACGCCGTCC 
CGTCTGGACG AACTGCAGGC CAAGGCCGAC GCAGTTGCCA AAGCCGAAGC CGACGCACTG 
GAAGCCGCTC AGCGGATCCG CGACGAGACG CCTCAGCAGT CGCCTGTCGA AGTACCGGCC 
AGGTAA
 
Protein sequence
MIKRNLLVMG LAVLLSACGF QLRGTGTTEL AIKELDVSAR NAYGETVTQL TRLLTSSGVK 
VYTGAPYKLI LTSENETQRT ISFSGSGRSA EYQLTNTLTY EIHGDRDRLL LDNKVSADRS 
YVHDGNNLTG SDQEASQVRQ EMRNDLIQKL MARLQQLTPS RLDELQAKAD AVAKAEADAL 
EAAQRIRDET PQQSPVEVPA R