| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4708 |
|---|
| Symbol | cmaE |
|---|
| ID | 1186391 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004578 |
|---|
| Strand | + |
|---|
| Start bp | 5334154 |
|---|
| End bp | 5335002 |
|---|
| Gene Length | 849 bp |
|---|
| Protein Length | 282 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 637396038 |
|---|
| Product | coronamic acid synthetase CmaE |
|---|
| Protein accession | NP_794452 |
|---|
| Protein GI | 28871833 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.781162 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCACAGCC TGTTCACACT AAACCTGGAC CTAGAGCGAG CGGGCAAGGT GATCTGTGTC
CAGAGCTTGC CGTTCGACAC TGCCCGGGAA ACCCTCCTAT TGTTGTCGCC CGTGGGCACC
CAGTGCTGCT ACATGAAGAA CGCTGCACTA TTTTTGATCA GCCATTTCAA TTTGATCATC
CTGGAAAGCG ACACCTGGCT GGCGTACGCC AACGAAGCCG GGGTCAATCC CGAAGAAGGC
GTTGCGGACT TCATCCGCCA GTTCAATGCA GCGCTGCCAG AACCCGTGCG TGTAGATGCA
CTGGTGGGCT ATTGCTCCTC AGCGCCTTTG GCACTCTTGG CAGCCAACCA AGGTGCTTGT
CGCACCTTGC TACTGCTTAA TGGCGCGTAC TTTCTCAAAG ACGACGGGGT GATCAAGAGC
CAATACGAGC GCGACGTGGA GCGCATGATG CAGTCCATTC CCCAAGGCAA TTGCGCCCAA
GTCTACGAAG CCGTGAGTCT GTTGCACACC AAAAGCGCCT ATACCCCGAG TGACTACCGC
TACCAGCAGG TTCGCCCTCT GCGAGAACTG TCTGCGTTCC GCCAGTACCT TACGTTCCTC
AACAGCTTGG CGAGCTTGGA ATCGGTCAGA ATTGCGCAGA CCGTAAAGAC CCCCACGCTG
GTGTGGTGCG GCAGCCAGGA CCGTTATACC GACACCGCAT CTTCCCGGTA CATTGCCCAG
CTGCTGCCTC ACAGTGAACT GGTGGAAGAT CCTGATGGCC AGCATCACGA TTTTGTCGAT
GGCCACGAAC GTTTGTACCT GACGATGACC CATTTTCTGA CCCGTCACAA GCAGAGGGCC
ATTCAATGA
|
|---|
| Protein sequence | MHSLFTLNLD LERAGKVICV QSLPFDTARE TLLLLSPVGT QCCYMKNAAL FLISHFNLII
LESDTWLAYA NEAGVNPEEG VADFIRQFNA ALPEPVRVDA LVGYCSSAPL ALLAANQGAC
RTLLLLNGAY FLKDDGVIKS QYERDVERMM QSIPQGNCAQ VYEAVSLLHT KSAYTPSDYR
YQQVRPLREL SAFRQYLTFL NSLASLESVR IAQTVKTPTL VWCGSQDRYT DTASSRYIAQ
LLPHSELVED PDGQHHDFVD GHERLYLTMT HFLTRHKQRA IQ
|
|---|
| |