| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4703 |
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| Symbol | hopAQ1 |
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| ID | 1186386 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 5330802 |
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| End bp | 5331053 |
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| Gene Length | 252 bp |
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| Protein Length | 83 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637396034 |
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| Product | type III effector HopAQ1 |
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| Protein accession | NP_794448 |
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| Protein GI | 28871829 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATCGAA TTTCAACCAG CTCAGTAAAT TCCAGCTTCA ATTACACGGC CCCTACGAAG
GAAGCGCAAA ACCGCTTCGC CTCAGCGCCC GACAATTCCC CTCTAGTTGC CACCACAACA
TCTATCACCC AAACCCTCGT GCAGCCTGGT CGACTCGATA AAAACCACCG TCTGATGGAC
TCCAAAATCA TCAATTTTTC AGTCGCATTT AATCTCGGTC GGACGCGCTC GATTGCTGGT
GGCAGTGCAT GA
|
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| Protein sequence | MNRISTSSVN SSFNYTAPTK EAQNRFASAP DNSPLVATTT SITQTLVQPG RLDKNHRLMD
SKIINFSVAF NLGRTRSIAG GSA
|
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