Gene PSPTO_4668 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_4668 
Symbol 
ID1186351 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand+ 
Start bp5271474 
End bp5272136 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content60% 
IMG OID637396005 
Producthypothetical protein 
Protein accessionNP_794419 
Protein GI28871800 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.495072 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACCCGT TGAACGTCAT CCAGGATTCG CTTTATTTTT TCCGTCGCCA TCTGGTCAGC 
ATTCTGGTGC TGTGCCTGCC GTTGGTGATC CTCGAAGTCC TCGCCAAGCA AGCCCTGAGC 
AGCGCCATGC CCGCCCAGGC CTCATCGGCC TACACGCTGG TGATCGGGCT GTTTTTCTAC 
CCGATCTACA CGGCGGCCCT GATTCTGTTT CTCGACTCGC GCAGCCGCGG TGAAGAAGCC 
ACCACCCGCG ACCTGCTGGC CATGGCGTTG CGCCTGTGGC CGACCTTCGC GGTGCTCTCG 
GCCATGAGCA CGTTGCTGAT CATGTTCGGC CTCTCGCTGT TCGTCGTTCC CGGCATCTGG 
GTGATGGTCA AGCTGGCGTT CAGCGAATAC TTGCTGGTGC TGCGCAAACT CACGCCGTTC 
ATGGCCATGC GCGAAAGCAT GCAAATGACC ACCGGGCATT TCACGCGCAT TCTGGTGTGC 
GTGCTGAGCG TCTACATTCC GCTGTGGCTG CTCGAAGGCG CGAGCCTTTA CGCCTTCCCC 
GAGCCAAAGA GCCTGCCGAT TTCAGTCGCC ATCGACAGCC TCAGCAGCTT CCTGCAACTG 
TTCACCACCA TCGTAATGTT TCGCCTGTTC ATGCTGGTCA GCGAGCCTGC GCACAGGGCC 
TGA
 
Protein sequence
MNPLNVIQDS LYFFRRHLVS ILVLCLPLVI LEVLAKQALS SAMPAQASSA YTLVIGLFFY 
PIYTAALILF LDSRSRGEEA TTRDLLAMAL RLWPTFAVLS AMSTLLIMFG LSLFVVPGIW 
VMVKLAFSEY LLVLRKLTPF MAMRESMQMT TGHFTRILVC VLSVYIPLWL LEGASLYAFP 
EPKSLPISVA IDSLSSFLQL FTTIVMFRLF MLVSEPAHRA