Gene PSPTO_4659 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_4659 
Symbol 
ID1186342 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand- 
Start bp5263123 
End bp5263677 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content65% 
IMG OID637395996 
ProductHAD-superfamily hydrolase 
Protein accessionNP_794410 
Protein GI28871791 
COG category[R] General function prediction only 
COG ID[COG0546] Predicted phosphatases 
TIGRFAM ID[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACGGCA CCCTGACCGT CCCGGTCCAC GACTTTCCGG CGATCAAGCG TGAACTGGGC 
ATCCCGCAGG ACGACGACAT TCTGGGCCAC CTTGCGGCAT TGCCTGCCGA CGAGTCGGCG 
GCCAAACATG CCTGGTTGCT GGAGCACGAG CGAGCGCTGG CGCTGGGCTC GCTGCCTGCC 
GACGGGGCAG TTGAACTGGT TCGCGAGCTG GCTGCACGTG GCTATCGTTT AGGCATACTG 
ACCCGTAACG CTCGGGAGCT GGCGCACATC ACCCTGCAGG CTATCGGCCT GGCGGACTGC 
TTTGCTGTCG ACGATGTACT GGGCCGCGAC GAAGCAACGC CCAAGCCCGA TCCTGCGGGC 
TTGCTGAAGC TGGCCAGCGC CTGGCGTGTC GAGCCACAAC GCATGGTCAT GATCGGCGAT 
TACCTGCACG ACCTGAGCTG CGGCCGTGCG GCGGGTTCGA AGACCGTTCT GGTCAACCTG 
AAGGACAACC CCTGGCCTGA ACTGACCGAC TGGCATGCGG TTGATTGCAC GGCGCTGCGC 
GGGATGTTGG GGTGA
 
Protein sequence
MDGTLTVPVH DFPAIKRELG IPQDDDILGH LAALPADESA AKHAWLLEHE RALALGSLPA 
DGAVELVREL AARGYRLGIL TRNARELAHI TLQAIGLADC FAVDDVLGRD EATPKPDPAG 
LLKLASAWRV EPQRMVMIGD YLHDLSCGRA AGSKTVLVNL KDNPWPELTD WHAVDCTALR 
GMLG