| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4509 |
|---|
| Symbol | omlA |
|---|
| ID | 1186192 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004578 |
|---|
| Strand | + |
|---|
| Start bp | 5080844 |
|---|
| End bp | 5081365 |
|---|
| Gene Length | 522 bp |
|---|
| Protein Length | 173 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637395850 |
|---|
| Product | outer membrane lipoprotein OmlA |
|---|
| Protein accession | NP_794262 |
|---|
| Protein GI | 28871643 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG2913] Small protein A (tmRNA-binding) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.292937 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAAAACA CCAAGCTCTT GCTAACCAGT TTCACCTTCG TGGGACTGCT CGCACTCGCC
GGTTGTTCAT TCCCCGGGGT TTACAAAATC GACATCCAGC AGGGTAATGT CGTCACGCAG
GACATGATAG ACCAGTTACG CCCCGGAATG ACCCGGCGGC AAGTACGGTT TATCATGGGC
AACCCCCTGC TGACCGACAC TTTCCACGCC GATCGGTGGG ATTACCTGTA TAGCCTGCAG
CCAGGTGGCG GTGAACGCCA GCAGGAGCGT GTCAGCCTGA TATTCAACGG CAATGACCAG
CTCGTGAGCT TGTCCGGCGA CTTCATGCCA GGCGTCAGCC GCGATGAAGC CATTCTCGGC
AAAGGCAGTG ATACCACTGC GCCTGTAGAG AATCAGCCGC AGCAGCCGCC TGAACAGCCA
GCCAAGCCAG GCTCGCTTCT GGACACCATC CAGCAGGATG TGGACAGCGT CGAGACCGTA
CCGGTCCCGA CTCAAGAGCC ACTGGACACT AACCCCCGTT AG
|
|---|
| Protein sequence | MQNTKLLLTS FTFVGLLALA GCSFPGVYKI DIQQGNVVTQ DMIDQLRPGM TRRQVRFIMG
NPLLTDTFHA DRWDYLYSLQ PGGGERQQER VSLIFNGNDQ LVSLSGDFMP GVSRDEAILG
KGSDTTAPVE NQPQQPPEQP AKPGSLLDTI QQDVDSVETV PVPTQEPLDT NPR
|
|---|
| |