Gene PSPTO_4499 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_4499 
Symbol 
ID1186182 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp5067874 
End bp5068185 
Gene Length312 bp 
Protein Length103 aa 
Translation table11 
GC content52% 
IMG OID637395840 
Productconserved hypothetical protein TIGR00253 
Protein accessionNP_794252 
Protein GI28871633 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1534] Predicted RNA-binding protein containing KH domain, possibly ribosomal protein 
TIGRFAM ID[TIGR00253] putative RNA-binding protein, YhbY family 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGCTCA CTCCAGAGCA GAAGAAACAA TACAAATCCA TTGGTCACCA TCTGAAACCG 
GTATTGACCG TGGCTGACAA TGGTTTGACT GAAGGTGTAC TTGCAGAGCT TGAACGCGCA
TTGAGCGATC ACGAGCTGAT CAAGATCAAG CTCAATATCC TCGACCGCGA AAGCCGTCTG
GGTGCCGTTG CAGAACTGTG CAAGGCTGGC TCAGCCGACC TGGTACAGGT CATCGGCAAA
ATGGCGTTGA TCTACCGCAA GAACCCAAAG GTAAACAAGC AACTGTCCAA CGTCCACCGC
GCGCACGGAT AA
 
Protein sequence
MPLTPEQKKQ YKSIGHHLKP VLTVADNGLT EGVLAELERA LSDHELIKIK LNILDRESRL 
GAVAELCKAG SADLVQVIGK MALIYRKNPK VNKQLSNVHR AHG