Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_4499 |
Symbol | |
ID | 1186182 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 5067874 |
End bp | 5068185 |
Gene Length | 312 bp |
Protein Length | 103 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 637395840 |
Product | conserved hypothetical protein TIGR00253 |
Protein accession | NP_794252 |
Protein GI | 28871633 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1534] Predicted RNA-binding protein containing KH domain, possibly ribosomal protein |
TIGRFAM ID | [TIGR00253] putative RNA-binding protein, YhbY family |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCGCTCA CTCCAGAGCA GAAGAAACAA TACAAATCCA TTGGTCACCA TCTGAAACCG GTATTGACCG TGGCTGACAA TGGTTTGACT GAAGGTGTAC TTGCAGAGCT TGAACGCGCA TTGAGCGATC ACGAGCTGAT CAAGATCAAG CTCAATATCC TCGACCGCGA AAGCCGTCTG GGTGCCGTTG CAGAACTGTG CAAGGCTGGC TCAGCCGACC TGGTACAGGT CATCGGCAAA ATGGCGTTGA TCTACCGCAA GAACCCAAAG GTAAACAAGC AACTGTCCAA CGTCCACCGC GCGCACGGAT AA
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Protein sequence | MPLTPEQKKQ YKSIGHHLKP VLTVADNGLT EGVLAELERA LSDHELIKIK LNILDRESRL GAVAELCKAG SADLVQVIGK MALIYRKNPK VNKQLSNVHR AHG
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