| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4488 |
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| Symbol | truB |
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| ID | 1186169 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 5055111 |
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| End bp | 5056028 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | |
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| Product | tRNA pseudouridine synthase B |
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| Protein accession | YP_001621409 |
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| Protein GI | 162533085 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.140717 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCTCAGG TCAAGCGTAT ACGTCGCAAT GTCAGCGGGA TCATCCTGCT CGACAAGCCA
CTGGGCTTCA CGTCCAACGC CGCTCTGCAA AAGGTTCGCT GGCTGCTCAA TGCCGAGAAG
GCGGGGCACA CGGGCAGCCT TGATCCTTTG GCCACCGGCG TTCTGCCGTT GTGCTTTGGC
GAGGCGACCA AGTTCTCTCA GTATCTGCTC GATTCGGACA AGTCCTACGA GACGCTGGCC
CAACTGGGCA AGACCACGAC CACTGGCGAC TCCGAGGGCG ATGTTTTGCT CACGCGTCCG
GTGACCGTTG GTCGCGACGA TATCGAAGCG GTTCTGCCCG ACTTTCGCGG GAAAATCAGC
CAGATACCTC CCATGTACTC GGCCCTCAAG CGTGACGGGC AGCCACTTTA CAAACTGGCG
CGTGCAGGGG AAGTAGTGGA GCGCGAGCCC CGTTCTGTTA CTATTGCGCG CCTGGAATTA
CTTGCTTGCG AAGGCGAGAC AGCACGTCTG TCGGTGGATT GCAGTAAAGG CACCTATATC
CGCACGCTGG TCGAGGATAT CGGTGAAAAA CTCGGTTGTG GTGCCTACGT CGCAGAACTG
CGCCGTACCC AGGCCGGGCC TTTCACGCTG GCTCAGACGG TTACGCTGGA AGAGCTCGAG
CAAGTGCACG CCGACGGTGG CAACGAAGCG GTTGACCGCT TCCTGATGCC TTCGGACAGC
GGCCTGCTGG ACTGGCCGTT GCTGAAGTTT TCCGAGCACA GTTCGTTTTA CTGGTTGCAT
GGTCAGCCGG TACGCGCCCC GGACGCACCG AAATTCGGTA TGGTGCGGGT GCAGGATCAC
GAAGGTCGCT TCATCGGTAT CGGTGAAGTC AGCGAAGACG GGCGTATTGC GCCGCGTCGA
TTGATTCGGT CAGAGTGA
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| Protein sequence | MAQVKRIRRN VSGIILLDKP LGFTSNAALQ KVRWLLNAEK AGHTGSLDPL ATGVLPLCFG
EATKFSQYLL DSDKSYETLA QLGKTTTTGD SEGDVLLTRP VTVGRDDIEA VLPDFRGKIS
QIPPMYSALK RDGQPLYKLA RAGEVVEREP RSVTIARLEL LACEGETARL SVDCSKGTYI
RTLVEDIGEK LGCGAYVAEL RRTQAGPFTL AQTVTLEELE QVHADGGNEA VDRFLMPSDS
GLLDWPLLKF SEHSSFYWLH GQPVRAPDAP KFGMVRVQDH EGRFIGIGEV SEDGRIAPRR
LIRSE
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