| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4480 |
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| Symbol | |
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| ID | 1186161 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 5043826 |
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| End bp | 5045409 |
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| Gene Length | 1584 bp |
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| Protein Length | 527 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637395820 |
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| Product | Tat (twin-arginine translocation) pathway signal sequence domain protein |
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| Protein accession | NP_794234 |
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| Protein GI | 28871615 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3540] Phosphodiesterase/alkaline phosphatase D |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGCCAGT TCGATCTCAA GCGTCGCCGT GTCATCCAGG CCGTTGGCGC CGTAGGTGCC
GGTCTGCTGT TACCGGGTGT TGCACCAGCG GTGATCGCCT CGGTGCAGGA TCGTCCGAAG
ATGGCCGACG GCGTGCAATC CGGCGATGTA TTCGGTGACA AGGCGATAGT CTGGAGCCGC
AGCGACCGGC CTTCGCGAAT GGTGGTCGAG TGGGACACCC GCAGCATGTT CACCCAGCCA
CGCCGTGTGG TGTCGGCGCT GGCCGATCAG CGCACTGACT TCACGGCGCG TGTCGAATTA
AGCGGGTTGC CGGTGGATCA GGCGATTTTC TACCGTGTCT CGTTTGAAGA TGCCCAGACC
GGTGTCGCCA GCGAACCCTG GTTCGGGCAT TTGCGCAGCA CGCCACAGCA GCGCCGCGAT
ATTCGTTTTG TCTGGAGTGG CGATACGGTC GGGCAGGGCT TTGGCATCAA CCCGGACATC
GGCGGCATGC GCATCTATGA AGCCATGCGC CTGCGCTTGC CGGACTTTTT TATCCACAGC
GGCGACACTA TTTATGCCGA CGGCCCGGTA CCAGCGCAGA TTACGGCCGA GGGCGGGCGC
ATCTGGCGCA ATATCACCAC CGAGGCGAAA AGCAAGGTCG CGGAAACCCT CGACGAATAC
CGTGGTAATT ACCGCTACAA CCTGATGGAT GAAAACCTGC GCCGCTTCAA CGCCGAAGTG
CCGCAGATCT GGCAGTGGGA CGACCACGAA GTCACCAACA ACTGGTCGCC CAGCAAGCAG
CTGGATGATC GCTACAAGGT CAAGGACATC CAGCTGTTGT CCTCGCGTGC CCGTCAGGCT
TATCTGGAGT ACGCGCCGCT GCGCCTGCAA GAGGCGGACA AGGGCGGGCG CATCTATCGC
AAGATTCCCT ACGGGCCGAT GCTCGACGTG TTTGTCCTCG ACATGCGCAG TTACCGCGAC
GGCAATGACG CCAATCTGGC CGACAAGCCT GGTCCGACGA CTGCTTTTAT GGGGTGCGAG
CAGCTTGACT GGCTCAAACG TGAACTTGAT GCGTCCACTG CGCAGTGGAA AGTGATTGCC
GCTGACATGC CCATCGGCCT GGGTGTGCCG GATGGCGAAG TGAGCCCGGG CGTGCCGCGC
TGGGAAGCGA TTGCCAACGG TAACGACGGC CCTGCGCTGG GCCGCGAGCT GGAAATTGCC
GAGCTGCTGG CGTATCTGCG TGCGCAGAAG GTTCGCGACT GTGTGTGGCT GACGGCCGAT
GTGCACTATT GCGCCGCGCA TCATTATCAG CCGGACCTGG CGGTGTTCCA GGATTTTGAT
CCATTCTGGG AGTTCGTCGC CGGGCCCTTG AATGCGAGCA GCTTCGGCCC TAACGTGCTG
GACAAGACCT TCGGACCTGA GCTGGTGTTC CAGAAGGCGC CTCCCGCGCA GAACACCTCG
CCTTTTGCGG GTTATCAATT CTTCGGTGAG GTGAATATCG ACGGGCAGAC GGGCGAAATG
TCTGTCGCCC TGCGCGATCT GGATGGTGTG TCGGTGTTCG AGCGCAAATT GCAGCCGGCA
GCGCAAGTCA GCCGCATCGT CTGA
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| Protein sequence | MSQFDLKRRR VIQAVGAVGA GLLLPGVAPA VIASVQDRPK MADGVQSGDV FGDKAIVWSR
SDRPSRMVVE WDTRSMFTQP RRVVSALADQ RTDFTARVEL SGLPVDQAIF YRVSFEDAQT
GVASEPWFGH LRSTPQQRRD IRFVWSGDTV GQGFGINPDI GGMRIYEAMR LRLPDFFIHS
GDTIYADGPV PAQITAEGGR IWRNITTEAK SKVAETLDEY RGNYRYNLMD ENLRRFNAEV
PQIWQWDDHE VTNNWSPSKQ LDDRYKVKDI QLLSSRARQA YLEYAPLRLQ EADKGGRIYR
KIPYGPMLDV FVLDMRSYRD GNDANLADKP GPTTAFMGCE QLDWLKRELD ASTAQWKVIA
ADMPIGLGVP DGEVSPGVPR WEAIANGNDG PALGRELEIA ELLAYLRAQK VRDCVWLTAD
VHYCAAHHYQ PDLAVFQDFD PFWEFVAGPL NASSFGPNVL DKTFGPELVF QKAPPAQNTS
PFAGYQFFGE VNIDGQTGEM SVALRDLDGV SVFERKLQPA AQVSRIV
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