| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4456 |
|---|
| Symbol | |
|---|
| ID | 1186137 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004578 |
|---|
| Strand | + |
|---|
| Start bp | 5019584 |
|---|
| End bp | 5020441 |
|---|
| Gene Length | 858 bp |
|---|
| Protein Length | 285 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637395796 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | NP_794210 |
|---|
| Protein GI | 28871591 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1660] Predicted P-loop-containing kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.720575 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGCATGA TCATCGTCAG CGGCCGCTCC GGCTCAGGCA AGAGTACGGC GCTCGATGTG
CTGGAAGACA ACGGTTTCTA TTGCGTCGAC AACCTGCCAG CCGGCCTGCT GCCGGAACTG
GCCGAGCGCG CGCTGATCAA CACCGAACTG GCTGAACCGC TGCTGGCAGT TTCCATCGAT
GCACGCAATC TGCCCAGCCA CCTCACACGC TTCCCGCAGA TGCTGGATGA AGTGCGCTCA
CGCAATATCC AATGCGACGT GCTTTACCTG GACGCCGACG AAGCCACCCT GCTCAAGCGT
TTCTCGGAAA CCCGACGTCG CCACCCGCTG AGCACAGCGG ACCGCTCGCT GGCTGAGGCG
ATACGGGACG AGACCACCCT GCTCGGCCCG ATCATCGACC TGGCCGATCT GAAAATCAAC
ACCACTCACC TGAACCTGTA CCAGCTGCGT GACGCTCTGA AACTGCGCCT GCTGAACAAG
CCCGAGCCGG GTACGGCTTT CCTGATCGAG TCGTTCGGCT TCAAGCGTGG CATGCCTGTC
GATGCAGACC TGGTATTTGA CGTGCGTTGC CTGCCCAACC CTTATTGGAA GCCTGAGCTG
CGCGACCATT CGGGCCTGGA ACAACCGGTT ATCGACTACC TGTCCGCGCA GGCCGATGTA
GAAGAGATGT TCCAGGATAT CTTCTCCTAC CTCAATAAAT GGCTGCCGCG CTTTGCAGCC
AGCAACCGCT CTTACGTTAC CATTGCCATC GGTTGCACCG GCGGGCATCA CCGCTCCGTC
TACCTGACCG AACGGCTTGG CCAGGTCTTG CAACAATCAC TCAAGAACGT TCAGGTCCGC
CACCGCGACC TTAGCTGA
|
|---|
| Protein sequence | MRMIIVSGRS GSGKSTALDV LEDNGFYCVD NLPAGLLPEL AERALINTEL AEPLLAVSID
ARNLPSHLTR FPQMLDEVRS RNIQCDVLYL DADEATLLKR FSETRRRHPL STADRSLAEA
IRDETTLLGP IIDLADLKIN TTHLNLYQLR DALKLRLLNK PEPGTAFLIE SFGFKRGMPV
DADLVFDVRC LPNPYWKPEL RDHSGLEQPV IDYLSAQADV EEMFQDIFSY LNKWLPRFAA
SNRSYVTIAI GCTGGHHRSV YLTERLGQVL QQSLKNVQVR HRDLS
|
|---|
| |