Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_4423 |
Symbol | sspB |
ID | 1186104 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 4991593 |
End bp | 4992006 |
Gene Length | 414 bp |
Protein Length | 137 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637395763 |
Product | stringent starvation protein B |
Protein accession | NP_794177 |
Protein GI | 28871558 |
COG category | [R] General function prediction only |
COG ID | [COG2969] Stringent starvation protein B |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.219018 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACTCCA GTCGCCCTTA TCTTGTTCGC GCTCTTTATG AGTGGATCGT CGATAACGAT TGCACCCCGC ATGTGCTGGT CAATGCGGAA TACCCATCGG TGCAGGTCCC TCAGGGCTTT GCCAATGATG GGCAGATTGT CCTGAACGTT TCGCCAAGCG CAGTGCGTCA TCTGCACATG GACAACGATG CAGTCAGCTT TGAAGGCCGC TTCGGCGGTG TGCCGCACAC ACTGTACGTG CCTGTGGCTG CCATCCTGGG CATTTATGCC CGCGAGAATG GTCAGGGTAT GGTGTTCGAC CTGGAGCCTT CCCTTGAGGA AGGTGAAGAG ATCGAGACCG AAGATGACAC GCCGCCACCC GACAGCGAGC CACCGCGCCC AAGCGGCAGG CCAAGCCTGA AGGTCGTGAA GTAA
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Protein sequence | MNSSRPYLVR ALYEWIVDND CTPHVLVNAE YPSVQVPQGF ANDGQIVLNV SPSAVRHLHM DNDAVSFEGR FGGVPHTLYV PVAAILGIYA RENGQGMVFD LEPSLEEGEE IETEDDTPPP DSEPPRPSGR PSLKVVK
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