Gene PSPTO_4396 details

Gene Information

• Locus tag: PSPTO_4396
• ID: 1186077
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas syringae pv. tomato str. DC3000
• Kingdom: Bacteria
• Replicon accession: NC_004578
• Strand: +
• Start bp: 4960979
• End bp: 4961557
• Gene Length: 579 bp
• Protein Length: 192 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 637395736
• Product: ATP:cob(I)alamin adenosyltransferase, putative
• Protein accession: NP_794150
• Protein GI: 28871531
• COG category: [S] Function unknown
• COG ID: [COG2096] Uncharacterized conserved protein
• TIGRFAM ID: [TIGR00636] ATP:cob(I)alamin adenosyltransferase

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGCTTTC GTTTGTCGAA GATATACACA CGCACTGGCG ACACCGGAGA AACCGGACTG 
GGCGACGGCC GTCGGGTGCC CAAGGACCAT CCACGCGTCG AGGCGATCGG TGAGGTCGAT 
ACGCTCAACA GTCAGCTCGG GTTACTGCTC GCGGGGCTTA TTGATGAGGC TCGGCGCGTG 
CCGGCGCTTA ACGAAGTGAT TGAGGTGCTT GTGCCCTGCC AGCATCGGCT GTTCGATCTG 
GGCGGGGAGC TGGCGATGCC GACCTACAAG GCGCTGAACA GTGCAGAGGT CGAGCGGCTG 
GAAGCGGCCA TTGATGTGTG GAATGAAGAG TTGGGGCCGC TGGAAAACTT CATTTTGCCC 
GGTGGCTCGA CGCTGATCGC CCAAGCGCAC ATCTGCCGCA GTCTGGCACG CAGCGCCGAA 
CGCCGCTGCC AGCATTTGAA CGCAGTCGAG CCATTGGAAG GCGCTGGGCT TGCGTACATC 
AACAGGCTGT CGGACCTGCT GTTCGTGGCA GCGCGACTGA TCGCCAGAAG GCAAGGCATT 
GCTGAAATAC TCTGGGAGCC CGCGCCCAAG CCGGTTTGA 

 

Protein sequence

MGFRLSKIYT RTGDTGETGL GDGRRVPKDH PRVEAIGEVD TLNSQLGLLL AGLIDEARRV 
PALNEVIEVL VPCQHRLFDL GGELAMPTYK ALNSAEVERL EAAIDVWNEE LGPLENFILP 
GGSTLIAQAH ICRSLARSAE RRCQHLNAVE PLEGAGLAYI NRLSDLLFVA ARLIARRQGI 
AEILWEPAPK PV