| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4380 |
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| Symbol | |
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| ID | 1186061 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 4941398 |
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| End bp | 4942156 |
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| Gene Length | 759 bp |
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| Protein Length | 252 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637395721 |
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| Product | oxidoreductase, short chain dehydrogenase/reductase family |
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| Protein accession | NP_794135 |
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| Protein GI | 28871516 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAATTGA AAAACAAGCT GATCATTATC ACCGGCGGGG GCCAAGGCCT TGGCAGGGCG
ATGGCCGAGT ACCTGGCCGG CAAGGGCGCA AATCTGGCGC TGGTGGACCT CAACCAGGAA
AAGCTCGACC AGGCTGTCGT GGCCTGTGCC GCCCTCGGGG TCAAGGCTCG CGCCTATTTG
TGCAATGTTG CCAATGAAGA ACAGGTCGTG GATACAGTCA ACAAGATTGC CGAAGACTTC
GGCGCCGTTC ATGGCCTGAT CAACAATGCC GGTATTCTGC GCGACGGCCT GCTGGTCAAG
GTCAAGGATG GCGAGATGAC CAAGCTGAGC CTTGCGCAAT GGCAGGCGGT GATCGACGTC
AACCTGACCG GCGTATTCCT CTGCACACGC GAAGTGGCAG CAAAAATGAT CGAGCAGAAG
AGTCAGGGTG CGATCATCAA CATCTCTTCG ATTTCCCGCG CAGGCAATAT CGGGCAGACC
AATTATTCAG CCGCAAAGGC CGGTGTCGCG GCGGCGACGG TTACATGGGC AAGGGAACTG
GCGCGCTACG GCATCCGTGT GGCAGGCGTA GCGCCTGGTT TCATTGAAAC CGAAATGACC
GCCAGCATGA GACCCGAAGC ACTGGAAAAG ATGACCTCGG CCATCCCGCT CAAGCGCATG
GGCAAGCCGG ACGAAATCGC CCATTCGGTG GCTTACATTC TTGAAAACGA TTATTTCAGC
GGACGCATTC TGGAGCTGGA CGGGGCGATG AGAATCTAG
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| Protein sequence | MELKNKLIII TGGGQGLGRA MAEYLAGKGA NLALVDLNQE KLDQAVVACA ALGVKARAYL
CNVANEEQVV DTVNKIAEDF GAVHGLINNA GILRDGLLVK VKDGEMTKLS LAQWQAVIDV
NLTGVFLCTR EVAAKMIEQK SQGAIINISS ISRAGNIGQT NYSAAKAGVA AATVTWAREL
ARYGIRVAGV APGFIETEMT ASMRPEALEK MTSAIPLKRM GKPDEIAHSV AYILENDYFS
GRILELDGAM RI
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