Gene PSPTO_4329 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_4329 
Symbol 
ID1186010 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp4880361 
End bp4880729 
Gene Length369 bp 
Protein Length122 aa 
Translation table11 
GC content57% 
IMG OID637395671 
ProductISPs1, transposase OrfA 
Protein accessionNP_794085 
Protein GI28871466 
COG category[L] Replication, recombination and repair 
COG ID[COG3293] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAAAGC GTTACGAACT CTCCGACGCA TCGTGGGAAT TGATTAAAGA CCTGGTTTTT 
CCCGAGCAGA AAATGGGTCG CCCACGCAGT GATGATCGCC TGGTACTGCA TGGAATCCTT
TGGATCCTGT GCTCGGGCGC TGCGTGGCGC GATCTTCCTG AGCGCTTTGG GCCTTGGTCA
ACGGTGTATC AGCGTTTTCG TGACTGGCGC GACGACGGCA CGTTCGACCG AATACTGGAG
CGCTTGCATA TTCGACTGAA CCGGGAAGGA CTGATCGATC TGGACACCTG GATGATCGAT
TCCACGGCGG TACGTGCAAC CCGAGCCTCT TCAGGCGCCG GGAAAAAGGG GGGTCTGAAG
AACCGCTAG
 
Protein sequence
MAKRYELSDA SWELIKDLVF PEQKMGRPRS DDRLVLHGIL WILCSGAAWR DLPERFGPWS 
TVYQRFRDWR DDGTFDRILE RLHIRLNREG LIDLDTWMID STAVRATRAS SGAGKKGGLK
NR