| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4316 |
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| Symbol | sbcB |
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| ID | 1185997 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 4866365 |
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| End bp | 4867795 |
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| Gene Length | 1431 bp |
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| Protein Length | 476 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637395658 |
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| Product | exodeoxyribonuclease I |
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| Protein accession | NP_794072 |
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| Protein GI | 28871453 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2925] Exonuclease I |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.117686 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACTTCCA GCATTTTCTG GTACGACTAC GAAACCACCG GTATCAACCC GCGCAACGAT
CGAGCGCTAC AGATGGCGGG AATTCGCACC GATGCCGAGC TCAATGAAAT AGCGCCTCCG
GTCAATCTTT ACTGCCAGCC CAGCGACGAC ATTCTGCCCC ATCCCGCAGC CTGTGTGATC
ACCGGCATAA CCCCCGCCAC GCTGGCAGAA AAAGGCTTGT GCGAGGCGGA CTTCATGACT
CGCGTGCACG CCGAGCTTGC TGCGCCCGGT ACATGCGGTG CCGGCTACAA TACGTTGCGT
TTCGACGACG AAGTCACCCG CTACAGTTTT TATCGCAACT TTTTCGATCC TTATGCGCGC
GAGTGGCAGG GCGGCAATAG TCGCTGGGAT TTGATTGATG TAGTGCGCGC AGCCTATGCA
TTACGTCCCG AGGGCATTGT CTGGCCCGAA CAGGACGGGC GAGTCACGCT CAAACTGGAA
CGCCTGACCG CTGCCAACGG TATTGATCAC GGGCAGGCCC ATGATGCGTT ATCCGATGTG
CGTGCAACTA TCGCTCTGGC GCGTTTGATT CGCGAAAAAC AGCCCAGGCT TTATGACTAC
CTGTTCACGC TGCGCACCAA ACAGAAAGTC CAGGAGCACA TTCACCTGAT GAAACCTCTG
GTGCATATTT CCGGACGGTT TTCCGCGGCA CGCAGTTATC TGGGCGTGGT ACTGCCGCTG
GCGTGGCATC CGCATAATCG CAATGCGCTG ATCGTTTGTG ATCTGCACCT GGATCATTCC
CCGTTGTTGC AGTGCGACGC TGAAACGCTC AAGCAGCGCT TATATACCCG GCTTGACGCA
CTGAAGGAAG GCGAATTGCC GGTACCGCTC AAACTATTGC ATATAAACCG GTGCCCGGTG
ATCGCGCCCT TGGGCGTACT GCGCAGCGAA GATCAGCAGC GGCTGAAACT GGACATGGCA
GGCTATCAGG CGCGCGCAGC GCAGTTGAGT GAAAGCCTCG AAGTTTGGCA GGATAAATTG
CAGGTTCTGT ACGGCAAGGA TGACTTCGTT GCAAGTGAAG ATCCCGAGCA ACAATTATAT
GATGGCTTTA TCGGTGACCG TGATCGCCGG TTGTGTGAGC AAGTTCGACA GGCCGAGCCT
GAACAGTTGG CCCGTGACGC ATGGCCGTTT GATGACGCTC GCTTGCCCGA TTTGTTATTC
AGGTACCGCG CTCGCAACTT TCCCGAGACC TTGAGCGCCG ACGAGCAACA TCGTTGGCAG
GATTTCTGTC GGCAGCGCCT GAGCAGCCCG GAATGGGGGG CGCCCACTAC CTTGCAGGAT
TTTACCAGCG CGCTGAATGA ATGCTCGCTT AGTGCCACTC CAGAGCAGTT GGAGGTGTTG
CGGCAATGGC AGGATCATGC CCTTCAACTG AGTAAACGCC TGGGTGTATA A
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| Protein sequence | MTSSIFWYDY ETTGINPRND RALQMAGIRT DAELNEIAPP VNLYCQPSDD ILPHPAACVI
TGITPATLAE KGLCEADFMT RVHAELAAPG TCGAGYNTLR FDDEVTRYSF YRNFFDPYAR
EWQGGNSRWD LIDVVRAAYA LRPEGIVWPE QDGRVTLKLE RLTAANGIDH GQAHDALSDV
RATIALARLI REKQPRLYDY LFTLRTKQKV QEHIHLMKPL VHISGRFSAA RSYLGVVLPL
AWHPHNRNAL IVCDLHLDHS PLLQCDAETL KQRLYTRLDA LKEGELPVPL KLLHINRCPV
IAPLGVLRSE DQQRLKLDMA GYQARAAQLS ESLEVWQDKL QVLYGKDDFV ASEDPEQQLY
DGFIGDRDRR LCEQVRQAEP EQLARDAWPF DDARLPDLLF RYRARNFPET LSADEQHRWQ
DFCRQRLSSP EWGAPTTLQD FTSALNECSL SATPEQLEVL RQWQDHALQL SKRLGV
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