Gene PSPTO_4279 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_4279 
Symbol 
ID1185960 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp4820633 
End bp4820926 
Gene Length294 bp 
Protein Length97 aa 
Translation table11 
GC content57% 
IMG OID637395621 
Producthypothetical protein 
Protein accessionNP_794035 
Protein GI28871416 
COG category[S] Function unknown 
COG ID[COG1937] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGAGC ACGAACATCT GCATGACCAC ACGCACCAGT CTCACGAGGC GGTTATCAAA 
CGCCTCAAGC GTGCAGACGG CCACTTGCGC AGCATCATCG CCATGATCGA AGACGGTCGT
GAATGCGTGG ACATTGCCCA GCAGCTGCAC GCTGTCGAGA AGGCGGTGTG CCAGGCGAAA
CGCACGCTGA TTCAGGATCA CATCGATCAT TGCCTTGAGA ACACGATGGG CGCACTCGCC
AACGGCGATC GGGCACCGCT GGAAGCTTTC AAGCAAATCA CCAAATACCT GTAG
 
Protein sequence
MSEHEHLHDH THQSHEAVIK RLKRADGHLR SIIAMIEDGR ECVDIAQQLH AVEKAVCQAK 
RTLIQDHIDH CLENTMGALA NGDRAPLEAF KQITKYL