| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4278 |
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| Symbol | |
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| ID | 1185959 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 4819268 |
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| End bp | 4820440 |
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| Gene Length | 1173 bp |
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| Protein Length | 390 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 637395620 |
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| Product | major facilitator family transporter |
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| Protein accession | NP_794034 |
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| Protein GI | 28871415 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTCAAG GCCGCAGCAC GATTAACCCC AGGGTCTATG CGCTGACCTT CACTGCATTT
GTAATGCTTT CCTCTGAATT TATCGTCGCA GGCCTACTGC CTCAAATTGC TACATCGCTT
GCCATCACCA TTGGTGCGGC GAGTGGGCTC GTGACAGCTT TTGCTTTAGG CATGGGTATC
AGCGCGCCCA TTATTGGAGT GTTAGCGCAC CGCGCCTCCA AACGATCCCT TCTGATATCT
GCGTGTGTGG CACTGCTTCT CGGGAATGGG ATTTCGGCAG CGTTTAACGA TTACTACATC
ATCCTCGCCG GTCGTGTACT CGGTGGTATC GGTGTCGCTG TTTTCTGGAC TAACGCCGCT
CTGGCCGCGA AGTCGCTGTC GCAAGGCCGC AATGAAAGCC TGGCGATTGG TAGAGTCCTG
GTAGGGATCT CGATCGCGTC GGTTGTCGGC GTCCCGGTCG GCAAACTCAT CGCAGACGCT
ACCAACTGGC GGATGGCAAT GTGGATGATG ACAGCGCTGA GCAGTGTGGC TTTGCTAACC
GTGTGGATTT GGGTGAGGCC TACTGAAGAA TCGCGGCAGA AAGAAAACCT GAGCGACACC
GTCCGTGTCG CCTTGAGATC CGACGTCGCC ATGACCTTGA TCAGTTCATG CCTAATGTTT
GCGGGCGTAG CCTCGGTATT CAATTTCCTG GCTACCTTCA TGGAAAAGGA AACTGGCTTC
GGCGAAATAA GCGTGACGCT ACTCCTGTGC CTCTACGGCA TCGCTGACAT CGCGAGCAAT
CTCATTTTAT CCAAACGTGT GAAGAACGAT CTTGAGCCCC TGTTCAGGCG GGTCTTGATG
ACGATGGCAG CCGGTATGTG CTTTCTGTCT TTGTTTGGCA GCCTCACCTG GGCGGTTCCA
ATCGCCGTCA TCATTGTCGC TAGCAGCCAC GCAGGCGTCA GTCTTCTCAT CGGTATCGAC
GTGCTACAAA GAGCTGGGGA CGCAGGTCAG TTGATCAATG CCATAAACGT ATCGATGATA
AATCTTGGTA TCGGCATAGG TGCAGCGATC ACAGGATTGC TTACAGATAG AGTCGGCGTC
GGCGCCGTAG GATGGGTCGG TGCATGCTTC ATTCTTCTGG CACTTAGTGT GCGCTGGAAG
ATTGAGCGCT CACAACAAAC GCACCACGGC TGA
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| Protein sequence | MTQGRSTINP RVYALTFTAF VMLSSEFIVA GLLPQIATSL AITIGAASGL VTAFALGMGI
SAPIIGVLAH RASKRSLLIS ACVALLLGNG ISAAFNDYYI ILAGRVLGGI GVAVFWTNAA
LAAKSLSQGR NESLAIGRVL VGISIASVVG VPVGKLIADA TNWRMAMWMM TALSSVALLT
VWIWVRPTEE SRQKENLSDT VRVALRSDVA MTLISSCLMF AGVASVFNFL ATFMEKETGF
GEISVTLLLC LYGIADIASN LILSKRVKND LEPLFRRVLM TMAAGMCFLS LFGSLTWAVP
IAVIIVASSH AGVSLLIGID VLQRAGDAGQ LINAINVSMI NLGIGIGAAI TGLLTDRVGV
GAVGWVGACF ILLALSVRWK IERSQQTHHG
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