| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4277 |
|---|
| Symbol | |
|---|
| ID | 1185958 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004578 |
|---|
| Strand | + |
|---|
| Start bp | 4818257 |
|---|
| End bp | 4819090 |
|---|
| Gene Length | 834 bp |
|---|
| Protein Length | 277 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 637395619 |
|---|
| Product | esterase/lipase/thioesterase family protein |
|---|
| Protein accession | NP_794033 |
|---|
| Protein GI | 28871414 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0657] Esterase/lipase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGACA TCCGCGACTC TTACGCAAAA ATGCTCGCGC AAAATCCAGC GCCAGCTGGC
GTCAAATTCG AAGCGGTCGA CATGGGCGGC GTACCGGGCA CACTGATTAC CCCTGATGAG
ATCAAAACCG ACGCAGTCGT CATGTACATT CACGGCGGTG CTTACATTGT TGGCCATCCA
GACGGCTACC ACGGCATCGG CGGCAACTAC GCAAAAATGC TCGGCGCTCG TGTCTACATG
CCGGACTATC GCCTTGCCCC TGAGCACAAG TTCCCAGCCT CTATTGACGA CACACTGCGC
GCTTACGAGT GGCTGCTTGA GCAGAAGATC CCGGCTAACA AGATCGCATT CTCTGGCGAG
TCAGCCGGCG GCGCGATGGT TGTCAGCGTG ATGGTGGCTG CGAAATCCAA AGGGCTTCCA
CTGCCTGCAG TTGGTTCGTC CATCTCGCCA TGGGCAAACC TTGAACACAC CGGTACCTCC
ATGAGCAATC GTGAAGGTCT GGATCCACTG AACTCCAAGC CTGTACTGGA TATCCTCGCT
AGAGCATTCC TGGGCGACAC ATTGGCCAAT CATCCTCTGG CTTCTCCCGT GTTCGCGGAC
GTCACCGGTC TCCCGCCAAT TTTGGTGCAG ATTGGCGAGA ACGAGTTGAT GTTGAGTGAT
GCGATGCGCC TTGCGACTCA CCTCGCTGAT AATCGCGTTC GCGTCGACCT GGAAGTTTGG
CCGGCAATGT TCCACGCTTG GCACTTCTAC GCCACCATGC TGCCAGAAGG TCAGCAGGCG
ATGGAGAGCT CCGTGCGCTT CATTGAGGTT GGCCTGGCCG ACGCTAACCG CTAA
|
|---|
| Protein sequence | MSDIRDSYAK MLAQNPAPAG VKFEAVDMGG VPGTLITPDE IKTDAVVMYI HGGAYIVGHP
DGYHGIGGNY AKMLGARVYM PDYRLAPEHK FPASIDDTLR AYEWLLEQKI PANKIAFSGE
SAGGAMVVSV MVAAKSKGLP LPAVGSSISP WANLEHTGTS MSNREGLDPL NSKPVLDILA
RAFLGDTLAN HPLASPVFAD VTGLPPILVQ IGENELMLSD AMRLATHLAD NRVRVDLEVW
PAMFHAWHFY ATMLPEGQQA MESSVRFIEV GLADANR
|
|---|
| |