| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4256 |
|---|
| Symbol | |
|---|
| ID | 1185937 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004578 |
|---|
| Strand | + |
|---|
| Start bp | 4796769 |
|---|
| End bp | 4797875 |
|---|
| Gene Length | 1107 bp |
|---|
| Protein Length | 368 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 637395601 |
|---|
| Product | NADH:flavin oxidoreductase/NADH oxidase family protein |
|---|
| Protein accession | NP_794015 |
|---|
| Protein GI | 28871396 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATAAGC TTTTTACACC TTTCGATTTG GCCGGTACTT CGCTAAAGAA TCGCGTTGTC
ATGGCCCCTA TGACCCGCAC CCGCACCTTG AACAACATCC CAAATGAAGC CAACGCGCTG
TACTACGCGC AACGTGCTTC TGCTGGTTTG CTGATCACCG AAGGTCTGCC TATTTCCGAC
GAGTCACGGG GCTATCTGTA CACCCCTGGT ATCTACGAAG ATGTGCATTT GCCCGGCTGG
CGCAATGTCA CTGACGCCGT ACACGCAAAA GGCGGGAAGA TTTTTGCGCA ACTCTGGCAC
GTAGGCCGCA TGTCTCATAT TTCCGTGCAT GGCATCGTGC CGGTCTCCTC GGGCACAGTA
CCTGCGGTAG ATACGACCGT GTATGCCTGG ATTGAACCTG GCAAAGCAGG CCCTGTTCAA
CCTAGTGCTC CACGTGCCCT GGAAACGGAA GAAGTGAAGC GCGTCATCGC TGACTTCGTG
AAGTCCGCGC GGATGGCCAT GGACGCCGGC TTTGACGGTA TCGAAATCAT GGCAGCCAAC
GGTTTCTTGT TCGATCAGTT CTTGAGCAGC TCCCTGAACA CGCGTACCGA CCAGTACGGT
GGCTCCATCG CTAACCGTCA GCGTTTTCTG CTTGAGACCA TTGATGCAAT CGCTGCCGAA
ATTGGTGGCT CGAAGATTGG TGTGCGCTTC TCGCCGTTTG GTCGACTGTA CGACTTCGGC
GTGTACGAAG GTGAAGAAGA AACCTGGATG AGCATGGCAT CTGCGCTCAA TGAAAGGGAA
TTGGCGTTTG TTCACCTGAA CTACCAGCCG ACCATCCTCG CCGCGCAAAC ACCGCCGGGT
TTCGGCGCTG CATTCCGTGA AGCCTACAAA GGCACCGTGA TGGCTGCTGG CGGCTTCACC
AAAGAGATCG CAGAGTCTGA GCTGGCTAAA GGTGAGCTAG ACCTGGTTGC CTTTGGCACG
GCCTACATTG CGAACCCGGA TTTAGTCGAG CGTATGCAAA ACAATTGGCC TCTGGCCGAG
AGTGATCGCG CTACCTACTA CGGCGTGAGC GGTTCGATTG AGAAGGGTTA CACCGACTAC
CCGGAATACG CAGCGGCTGA AGCCTAA
|
|---|
| Protein sequence | MNKLFTPFDL AGTSLKNRVV MAPMTRTRTL NNIPNEANAL YYAQRASAGL LITEGLPISD
ESRGYLYTPG IYEDVHLPGW RNVTDAVHAK GGKIFAQLWH VGRMSHISVH GIVPVSSGTV
PAVDTTVYAW IEPGKAGPVQ PSAPRALETE EVKRVIADFV KSARMAMDAG FDGIEIMAAN
GFLFDQFLSS SLNTRTDQYG GSIANRQRFL LETIDAIAAE IGGSKIGVRF SPFGRLYDFG
VYEGEEETWM SMASALNERE LAFVHLNYQP TILAAQTPPG FGAAFREAYK GTVMAAGGFT
KEIAESELAK GELDLVAFGT AYIANPDLVE RMQNNWPLAE SDRATYYGVS GSIEKGYTDY
PEYAAAEA
|
|---|
| |