| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4225 |
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| Symbol | nadB |
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| ID | 1185905 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 4758704 |
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| End bp | 4760320 |
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| Gene Length | 1617 bp |
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| Protein Length | 538 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637395571 |
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| Product | L-aspartate oxidase |
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| Protein accession | NP_793986 |
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| Protein GI | 28871367 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0029] Aspartate oxidase |
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| TIGRFAM ID | [TIGR00551] L-aspartate oxidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCAAC ATTTTCAGCA CGACGTACTG GTAATCGGCA GCGGCGCTGC AGGCCTGAGC
CTGGCGCTTA CCCTCCCCGA CCATCTGCGG ATTGCGGTTC TGAGCAAGGG TGACCTGTCC
AACGGCTCGA CATTCTGGGC CCAGGGCGGT GTTGCGGCGG TCCTTGATGA CACTGACACT
GTGCAGTCTC ATGTCGAAGA CACGTTGAAC GCCGGTGGCG GCCTGTGCAA CGAAGACGCA
GTGCGCTTTA CCGTCGAGCA CAGTCGTGAG GCGATTCAGT GGCTGATTGA TCAAGGCGTC
CCTTTCACCC GGGGCGACGA CGCAGACGTC GATGAAAGCG GCTTTGAATT TCACCTGACC
CGCGAGGGCG GCCACAGTCA TCGTCGAATC ATTCATGCCG CCGACGCCAC AGGCGCGGCC
ATCTTTCGTA CACTGCTTGA GCAGGCCCGC AAACGGCCGA ACATCGAACT GCTTGAACAG
CGCGCCGCCA TCGACCTGAT CACCGAGCGC CGCCTGGGCC TTGAAGGCCA GCGTTGCCTG
GGCGCTTACG TGCTCAATCG CAACAGCGGC GAAGTGGATA CATACAGCGC GCGCTTCACG
ATCCTGGCCT CGGGCGGCGC TGCCAAGGTC TATCTGTACA CCAGCAACCC GGACGGTGCC
TGCGGCGACG GGATCGCCAT GGCCTGGCGC TCCGGCTGTC GGGTGGCTAA CCTTGAATTC
AATCAGTTTC ACCCGACCTG CCTGTACCAC CCGCAGGCCA AGAGCTTTCT GATTACCGAA
GCCCTGCGCG GTGAAGGCGC TTACCTCAAG TTGCCCAACG GCGAACGCTT CATGCCGCGA
TTCGACGAAC GGGCAGAACT GGCCCCTCGT GACATCGTTG CCCGCGCCAT TGACCACGAA
ATGAAGCGGC TGGGTATCGA CTGCGTCTAT CTGGACATCA GCCACAAGCC CGAAGCTTTC
ATCAAAACGC ACTTCCCGAC CGTCTACGAG CGCTGCCTGG AATTTTCCAT CGACATCACT
CGCGAGCCGA TCCCCGTCGT CCCGGCAGCG CATTACACCT GTGGCGGCGT GATGGTCGAC
AGCCAGGGCC ATACCGATGT ACCCGGCCTG TACGCTATCG GCGAAACCAG CTTCACCGGC
CTGCACGGCG CCAACCGCAT GGCCAGCAAC TCGCTGCTGG AATGCTTCGT CTACGCCCGC
TCGGCAGCCG CAGACATCGA AAAGCAGTTG TCCAGTGTGC CGATGCCGAC TGACCTGCCA
GCGTGGGATG CCAGCCAGGT AACCGACTCG GACGAAGACG TGATCATCGC CCACAACTGG
GACGAATTAA GGAGGTTCAT GTGGGATTAC GTCGGTATCG TGCGCACCAA CAAACGCTTG
CAGCGCGCCC AGCACCGTGT GCGGTTGTTG CTCGACGAAA TTGATGAGTT CTACAGCAAC
TACAAGGTCA GCCGCGACCT GATCGAGCTG CGTAACCTCG CCCAGGTGGC CGAACTGATG
ATCTGCTCGG CCATGCAACG CAAGGAAAGC CGCGGGCTGC ATTACACGCT GGATTACCCG
GACATGCTCC CGGAGGCACT GGACACTATT CTGGTACCGC CCACTTTCGT CGGCTGA
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| Protein sequence | MSQHFQHDVL VIGSGAAGLS LALTLPDHLR IAVLSKGDLS NGSTFWAQGG VAAVLDDTDT
VQSHVEDTLN AGGGLCNEDA VRFTVEHSRE AIQWLIDQGV PFTRGDDADV DESGFEFHLT
REGGHSHRRI IHAADATGAA IFRTLLEQAR KRPNIELLEQ RAAIDLITER RLGLEGQRCL
GAYVLNRNSG EVDTYSARFT ILASGGAAKV YLYTSNPDGA CGDGIAMAWR SGCRVANLEF
NQFHPTCLYH PQAKSFLITE ALRGEGAYLK LPNGERFMPR FDERAELAPR DIVARAIDHE
MKRLGIDCVY LDISHKPEAF IKTHFPTVYE RCLEFSIDIT REPIPVVPAA HYTCGGVMVD
SQGHTDVPGL YAIGETSFTG LHGANRMASN SLLECFVYAR SAAADIEKQL SSVPMPTDLP
AWDASQVTDS DEDVIIAHNW DELRRFMWDY VGIVRTNKRL QRAQHRVRLL LDEIDEFYSN
YKVSRDLIEL RNLAQVAELM ICSAMQRKES RGLHYTLDYP DMLPEALDTI LVPPTFVG
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