| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4203 |
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| Symbol | |
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| ID | 1185883 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 4734465 |
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| End bp | 4735346 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637395549 |
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| Product | polysaccharide deacetylase family protein |
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| Protein accession | NP_793964 |
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| Protein GI | 28871345 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.509366 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCAAAG AAATTCTGTG TGCGTTTGGT GTAGATGTCG ATGCCGTCGC GGGCTGGCTC
GGCTCGTATG GCGGCGAAGA TTCGCCGGAC GATATCTCGC GCGGGCTGTT CGCCGGGGAA
GTCGGTGCGC CACGTTTGCT CAAGCTGTTC GAGCGTTACG GCCTGCGCAC CACCTGGTTC
ATTCCGGGGC ATTCGATGGA AACGTTCCCG GAGCAGATGA AGGCCGTGGC CGACGCCGGG
CATGAAATCG GCGTGCATGG TTACAGCCAT GAAAACCCGA TTGCGATGAC CCCCGAGCAG
GAAGAAATCG TCCTCGATAA GTCTATCGAA CTGATCACCC AAATGACCGG CAAGCGCCCG
ACCGGCTACG TCGCGCCCTG GTGGGAATTC AGCAACGTCA CCAACGAGCT GCTGCTCAAG
AAGGGCATCA AGTACGACCA CAGCCTGATG CATAACGACT TTCATCCTTA CTACGTTCGC
GTCGGCGACA AGTGGACCAA GATCGATTAC AGCCAGCATC CCGACACCTG GATGAAACCG
CTGGTGCGCG GCGAAGAAAC CGATCTGGTG GAAATTCCCG CCAACTGGTA CCTCGACGAC
CTGCCGCCGA TGATGTTCAT CAAGAAAGCG CCGAACAGCC ACGGTTTCGT CAACCCACGG
CACCTGGAAG AGATGTGGCG CGACCAGTTC GACTGGGTCT ATCGCGAGCA CGAACACGCT
GTCTTCACCA TGACCATTCA CCCGGACGTG TCTGGTCGCC CGCAAGTGCT GCTGATGCTG
GAGCGCTTGA TCGAGCACAT TCAACGCCAT GCCGGCGTCA AGTTCGTCAC TTTCGACGAA
ATAGCCGACG ACTTCGTGCG TCGCAACCCC CGTACCCGCT GA
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| Protein sequence | MAKEILCAFG VDVDAVAGWL GSYGGEDSPD DISRGLFAGE VGAPRLLKLF ERYGLRTTWF
IPGHSMETFP EQMKAVADAG HEIGVHGYSH ENPIAMTPEQ EEIVLDKSIE LITQMTGKRP
TGYVAPWWEF SNVTNELLLK KGIKYDHSLM HNDFHPYYVR VGDKWTKIDY SQHPDTWMKP
LVRGEETDLV EIPANWYLDD LPPMMFIKKA PNSHGFVNPR HLEEMWRDQF DWVYREHEHA
VFTMTIHPDV SGRPQVLLML ERLIEHIQRH AGVKFVTFDE IADDFVRRNP RTR
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