| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4197 |
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| Symbol | |
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| ID | 1185877 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 4729025 |
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| End bp | 4730221 |
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| Gene Length | 1197 bp |
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| Protein Length | 398 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637395543 |
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| Product | hypothetical protein |
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| Protein accession | NP_793958 |
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| Protein GI | 28871339 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.982148 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCATCA CTTTACGTGT GCTCGGCACT TCGGTGACCT TGCTCGAGTC CTTGCGCGAG
CGAGCCGAGC AGGAACTAGG CATCAAGCTG GTCTACCAGA TTCATGACGT GCAGACCGCG
CAGCGCATCG CGGTCATGCA GCCTGACAGC TACGACCTCT ATGATCAGTG GTTTCACAAC
GTCGATTTCG TCTGGCCTGC GCGGGCGATT CAGCCCATCG ACACGCGTCG TATTGCGCTG
TGGCATGAGA TCAACGACCT GCCCAAGCGC GGTCGTTTAC GGCCCACTGA TCAACCGGGC
AGCGGCAGCG TGCCCAGCGA GCGCCTGTTC GTGCAGCACG ACGGCAGCCT TGGCAGCACG
GTGACCGAGC GCATCAGCAT GTTGCCGTTG ACCCACAACG CTGACAGTTT TGCCTATCGC
CCCGAGCGCT TGCCGGAAGG TTTGAGCCCT GCGGATGAAA GCTGGGGCTG GCTGCTGGAT
TCAGCGTGGG GCGGGCGTAT CGCGTTACAA AGTGACGCCG CCATCGGCGC GCTGGATGCC
GCACTGGCGG TACAGGGCGC GGGGCTTGCG CAGTTCAACG ACATCGGCAA CATGAGCATC
GAAGAAATCG ACCTGCTCGC CGATGTGCTG GTGCGCAAAC AGCAGCAAGG GCACTTCGGC
GCATTCTGGT CCGACGACGA AGAAGCTGCC GAACTGATGC TCAGCCCGAC CATTGATATC
CAGAGCCTGT GGTCACCGAC CCTGGTCAGG TTGCACCGCG CTGGCGTGAA ATACCGTGTG
GCGGTGCCCA AAGAGGGCTA TCGCGGCTGG TTCGGCGGGC TGTCCTTGTC GCGCTACGCC
AAAGGGCCGG TGCTGGATGC GGCATATGCC TACCTGAACT GGTGGCTTTC GGGATGGCCG
GGTGCAGTCA TGGCGCGACA GGGGTATTAC ATCGGCAATC CGGCACGCAG CCGTGACCAT
CTGAGCGCCG CCGAATGGGA CTACTGGTAC GCAGGCTTGC CCGCCCGCGA ACAACTGCTC
GGCAGCGACG GCTTGCCCCT GATCGACGCC GGAGAGATCC GCGACGGCGG CTCCTACGAA
GAACGCATGG GCCACATCGC CGTTTGGAAC TCGGTCATGA ACGAACACAA CTACCTGGTA
CGCCGCTGGA GCGACATCCT GCGCGCCAGC GGCAAAAGCA GCGCGAAGGC TCGTTAG
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| Protein sequence | MTITLRVLGT SVTLLESLRE RAEQELGIKL VYQIHDVQTA QRIAVMQPDS YDLYDQWFHN
VDFVWPARAI QPIDTRRIAL WHEINDLPKR GRLRPTDQPG SGSVPSERLF VQHDGSLGST
VTERISMLPL THNADSFAYR PERLPEGLSP ADESWGWLLD SAWGGRIALQ SDAAIGALDA
ALAVQGAGLA QFNDIGNMSI EEIDLLADVL VRKQQQGHFG AFWSDDEEAA ELMLSPTIDI
QSLWSPTLVR LHRAGVKYRV AVPKEGYRGW FGGLSLSRYA KGPVLDAAYA YLNWWLSGWP
GAVMARQGYY IGNPARSRDH LSAAEWDYWY AGLPAREQLL GSDGLPLIDA GEIRDGGSYE
ERMGHIAVWN SVMNEHNYLV RRWSDILRAS GKSSAKAR
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