Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_4073 |
Symbol | fmdA |
ID | 1185753 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 4577872 |
End bp | 4579104 |
Gene Length | 1233 bp |
Protein Length | 410 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637395420 |
Product | formamidase |
Protein accession | NP_793835 |
Protein GI | 28871216 |
COG category | [C] Energy production and conversion |
COG ID | [COG2421] Predicted acetamidase/formamidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.398995 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCGAAG TTCTGATCAA AGTCGACCTC AATCAGCCTG TGACTGAAAA CGAGCAGATC CACAACCGCT GGCACCCGGA TATTCCCATG GCGTGCTGGG TCAAGCCCGG TGAAGACTTT ATTCTGGAAA CCTACGACTG GACCGCCGGG GCTATCAAGA ACAACGACGA TGCCAGCGAT GTACGCGACG TCGATCTTTC GACGGTCCAT TACCTGTCCG GCCCGGTCGG TGTGCACGGT GCAGAGCCCG GCGACCTGCT GGTGGTCGAC CTGCTGGACA TCGGCGCTCG GGCTGATTCG CAGTGGGGCT TCAACGGCTT CTTTTCCAGA CAGAACGGCG GCGGGTTTCT TACCGACCAC TTTCCGATGG CTCAGAAGGC GATCTGGGAC TTCAAGGGCA TGATGACCAG TTCGCGGCAC ATTCCCGGTG TCGAGTTTGC CGGTTTGATC CATCCGGGGC TGATCGGCTG TCTGCCGGAC CACAAGATGC TCGCCGAGTG GAACCGTCGC GAGCAGGAAT TGATCGACAC CGACCCTGGG CGCGTCCCGC CGCTGGCCAA CCCGCCGCAC GCCAAAACCG CGCACCTGGG CAAGATGAAA GGCGGGCCCG AGCGTGATCT GGCTGCTGCC ACCGGGGCGC GCACCGTGCC GCCCCGCGAA CATGGCGGTA ACTGCGATAT CAAGGATTTG TCCCGTGGTT CCAAGGTGTT TTTTCCGGTG TACGTGGACG GCGCCGGTCT GTCGGTGGGC GATCTGCACT TCAGTCAGGG CGATGGCGAG ATCACCTTTT GCGGTGCCAT TGAAATGGCT GGCTGGGTGC ACATGCGCGT CGAGCTGATC AAAGGCGGCA TGGCCAAGTA CGGGATCAAG AACCCGGTCT TCAAACCCAG CCCGATCGTG CCGACCTACA ACAAGTACCT GATCTTTGAG GGCATCTCGG TCGATGAATC AGGCCAGCAG CACTACCTGG ACGTCAACGT CGCCTATCGA CAGGCGTGCC TCAACGCCAT CAACTACATG ACCAAGTTCG GCTACTCGCC CGCGCAGGGC TACGCGCTGC TGGGTTCGGC GCCGGTGCAG GGCCATATCA GCGGCATCGT CGATATTCCC AATGCCTGCG CAACGCTCTG GCTGCCGACC GAGATCTTCA AGTTCGATAT CAACCCGAAC GCCGACGGCC CGACCCGCTT TATCGACGGC AGCATCGACT TGCCGATTGC GCCGGACAAG TAA
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Protein sequence | MTEVLIKVDL NQPVTENEQI HNRWHPDIPM ACWVKPGEDF ILETYDWTAG AIKNNDDASD VRDVDLSTVH YLSGPVGVHG AEPGDLLVVD LLDIGARADS QWGFNGFFSR QNGGGFLTDH FPMAQKAIWD FKGMMTSSRH IPGVEFAGLI HPGLIGCLPD HKMLAEWNRR EQELIDTDPG RVPPLANPPH AKTAHLGKMK GGPERDLAAA TGARTVPPRE HGGNCDIKDL SRGSKVFFPV YVDGAGLSVG DLHFSQGDGE ITFCGAIEMA GWVHMRVELI KGGMAKYGIK NPVFKPSPIV PTYNKYLIFE GISVDESGQQ HYLDVNVAYR QACLNAINYM TKFGYSPAQG YALLGSAPVQ GHISGIVDIP NACATLWLPT EIFKFDINPN ADGPTRFIDG SIDLPIAPDK
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