Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_4050 |
Symbol | |
ID | 1185730 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 4557596 |
End bp | 4558348 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637395397 |
Product | hypothetical protein |
Protein accession | NP_793812 |
Protein GI | 28871193 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.346745 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGCCACCA GCATCGATAT CGGCGGCGAT CTTTCGGCCG AGTTCTCGTT CGGCTCGTTC GATCAGCTCT TGGAGGCCGC TTTCTACGGC GCCTGGACGA ACGACGTGCT GCGTGTGGGC GATACTCGCA ACACCTTCAG CATCGCCAAA GGTTACAACG ACATCGGCGT CTACGGCGTC TTCAAGGGCG CTCACGTGTC CACCTTCGCG CTGGAGATTC CAGAAGAAGG CAAGGTCACC GCCACGTTCA ACATGGCATG CCTGGACTAC ACCGACAGCG AGACGCCGAT TGTCGTCACG CCGAACGCGC CGACCACCAC ACCGTTCCTG TCGAACAACA GTGTCGGCAC GATTCTGGTG AATGGCCAGT CGCTCGAAGA CGTGGCCTGC GTCTCGGCCA TGACCATCAA CCTGGATAAC AGTCTGCAGA CTCAGCGCTG CCTGGGCTCC GATCGACTCG GCCCAGGCGC CCACATCGCC ACCGAAGCGG CCATCACCGG CAGCATCACC CTGGCATGGT CCAAGCGCGC GTGGCAGATC TGGAAGAACA CGTTCACCCG ACTGCCGATC GCGGTCGAGT TCCCCATCAC CGACTCGCTG GGCAACAAGT ACACGTTCAA CTTCCCGGCC GTGGAAGTGG ATGGCGAACT GCCGAGCGGC GGCAAGCGCG ACCTGATCCA GATCGAGCTG AACTACACCG TGGCCAAGCA GAGCCCGACC ATCACCCGTG ACGCTGCTGA CCCAGCACCG TAA
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Protein sequence | MATSIDIGGD LSAEFSFGSF DQLLEAAFYG AWTNDVLRVG DTRNTFSIAK GYNDIGVYGV FKGAHVSTFA LEIPEEGKVT ATFNMACLDY TDSETPIVVT PNAPTTTPFL SNNSVGTILV NGQSLEDVAC VSAMTINLDN SLQTQRCLGS DRLGPGAHIA TEAAITGSIT LAWSKRAWQI WKNTFTRLPI AVEFPITDSL GNKYTFNFPA VEVDGELPSG GKRDLIQIEL NYTVAKQSPT ITRDAADPAP
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