Gene PSPTO_4050 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_4050 
Symbol 
ID1185730 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp4557596 
End bp4558348 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content62% 
IMG OID637395397 
Producthypothetical protein 
Protein accessionNP_793812 
Protein GI28871193 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.346745 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCCACCA GCATCGATAT CGGCGGCGAT CTTTCGGCCG AGTTCTCGTT CGGCTCGTTC 
GATCAGCTCT TGGAGGCCGC TTTCTACGGC GCCTGGACGA ACGACGTGCT GCGTGTGGGC
GATACTCGCA ACACCTTCAG CATCGCCAAA GGTTACAACG ACATCGGCGT CTACGGCGTC
TTCAAGGGCG CTCACGTGTC CACCTTCGCG CTGGAGATTC CAGAAGAAGG CAAGGTCACC
GCCACGTTCA ACATGGCATG CCTGGACTAC ACCGACAGCG AGACGCCGAT TGTCGTCACG
CCGAACGCGC CGACCACCAC ACCGTTCCTG TCGAACAACA GTGTCGGCAC GATTCTGGTG
AATGGCCAGT CGCTCGAAGA CGTGGCCTGC GTCTCGGCCA TGACCATCAA CCTGGATAAC
AGTCTGCAGA CTCAGCGCTG CCTGGGCTCC GATCGACTCG GCCCAGGCGC CCACATCGCC
ACCGAAGCGG CCATCACCGG CAGCATCACC CTGGCATGGT CCAAGCGCGC GTGGCAGATC
TGGAAGAACA CGTTCACCCG ACTGCCGATC GCGGTCGAGT TCCCCATCAC CGACTCGCTG
GGCAACAAGT ACACGTTCAA CTTCCCGGCC GTGGAAGTGG ATGGCGAACT GCCGAGCGGC
GGCAAGCGCG ACCTGATCCA GATCGAGCTG AACTACACCG TGGCCAAGCA GAGCCCGACC
ATCACCCGTG ACGCTGCTGA CCCAGCACCG TAA
 
Protein sequence
MATSIDIGGD LSAEFSFGSF DQLLEAAFYG AWTNDVLRVG DTRNTFSIAK GYNDIGVYGV 
FKGAHVSTFA LEIPEEGKVT ATFNMACLDY TDSETPIVVT PNAPTTTPFL SNNSVGTILV
NGQSLEDVAC VSAMTINLDN SLQTQRCLGS DRLGPGAHIA TEAAITGSIT LAWSKRAWQI
WKNTFTRLPI AVEFPITDSL GNKYTFNFPA VEVDGELPSG GKRDLIQIEL NYTVAKQSPT
ITRDAADPAP