Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_4042 |
Symbol | |
ID | 1185722 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 4550719 |
End bp | 4551117 |
Gene Length | 399 bp |
Protein Length | 132 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637395389 |
Product | hypothetical protein |
Protein accession | NP_793804 |
Protein GI | 28871185 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.145996 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCCATA GAGACTGGAC CACGCGTCTG AACGACGTGA TCAAGGCTGC CCAAGGGCGG CCTTTTTCAT GGGGCGAATT TGACTGCTGC CTATTCGCCG CCGACTGCTC GAATGCGGTA TGTGGTGTCG ATCCTGCCGA GCAATACCGA GGCTCCTACA AAACGGAAGC GGGCGCCAAG CGTGCGCTGA AGAGGCGTCA CGGCAGCCTG GAAGCTGCAT GGGACGCCTG TTTTGCAAGG GTTGCAGTCC CGTTCATCCA GCGAGGTGAC GTCGTCATGT ACGAAGCACC AGCAGGTCGC AGCATGGCCG TGTTCTGGGC TGGTGATTAT TGGGCGACGA CCGATGACGG CGTTGCTCGC GTTGTGTGCG AGCCGTTGTC AGCCTGGAGG GTTGAATAA
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Protein sequence | MRHRDWTTRL NDVIKAAQGR PFSWGEFDCC LFAADCSNAV CGVDPAEQYR GSYKTEAGAK RALKRRHGSL EAAWDACFAR VAVPFIQRGD VVMYEAPAGR SMAVFWAGDY WATTDDGVAR VVCEPLSAWR VE
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