| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4007 |
|---|
| Symbol | |
|---|
| ID | 1185686 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004578 |
|---|
| Strand | - |
|---|
| Start bp | 4521415 |
|---|
| End bp | 4521939 |
|---|
| Gene Length | 525 bp |
|---|
| Protein Length | 174 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637395354 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | NP_793769 |
|---|
| Protein GI | 28871150 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCAAGC TCAAGCTGCC GTTCTGGCTC GAAGGGTTAG AGCTGACCAA GCTGGTGACC
ACCGCCCAGC TCTGGTGGGA GCAGGCCACC GAGTGGCTGC GCTGGCCTTA CCTGCAGTTC
GACGCTGACA CCTGCCACCT GTCCATTCTG GAACTGTGGG CCTGGCAGCG CGACGTCACC
CGCTTTGCCG CCGAGCCGGA AAGTCTGTTC CGGTTGCGGG TCAAGTACGC CTTCATCAAT
TCCGTCGACG CCGGCAGCAC TGCTGGATTG AAACGCATCC TGGAGCGCCT CGGCGTCGGC
TATGTCGAGA TTCAGGAGCG TATGCCCGAA CGCGACTGGG ACGTCGTGCT GCTCACCCTG
AGCGATTCCC AACTGTCCGA GAACCCCGAC CTGTTGCGCG TGCTGATCCG TCAGTACGGG
CGCACCTGTC GCCGGTACGA CTTCGTAACC ATCACCCCGG TGCGGCTTGC TGTTGCCCTG
GTGGATTTCA ATGACGATCA GCAAACGCTG GTCGCCAGCC TTTAG
|
|---|
| Protein sequence | MIKLKLPFWL EGLELTKLVT TAQLWWEQAT EWLRWPYLQF DADTCHLSIL ELWAWQRDVT
RFAAEPESLF RLRVKYAFIN SVDAGSTAGL KRILERLGVG YVEIQERMPE RDWDVVLLTL
SDSQLSENPD LLRVLIRQYG RTCRRYDFVT ITPVRLAVAL VDFNDDQQTL VASL
|
|---|
| |