Gene PSPTO_3946 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_3946 
Symbol 
ID1185620 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp4455286 
End bp4455753 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content56% 
IMG OID637395293 
Producthypothetical protein 
Protein accessionNP_793712 
Protein GI28871093 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0442328 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCTGTCTC CCCATCTTCC AGGTCGGTCC TATGCATCGA TTACACACCG TGCGTACCTG 
CTGGGAGTGA AGAAAAGCAG CAAGTACATG CGCGACCTGG GCGCGGCCAA TATGCAAGCC
GGCGCTGAGC GGCTCGGTCG GGAGTTTTGG GAGAAACCGC TGGGCTCGTT GCGACATGAG
CAAACGAGGG TGCTGATCAA GCTTGGTCAG CCCGATATCT GGAAAGGCCT ACACATCCAC
GCGTGGGAGT TGGTCAACGG GCCGGTGCCC AACGGCCACA TCGTCGCTGC CAAGGACAGT
AACCGGAAGA ACATAAGCCT GGACAACCTG TGCCTTAGAA CGGTGAGCGA GCATGTAGTC
CGCACCTGTC CCAACTATCA GAACCTGCCC AACGAACTCG TCGACGTCCT GCACCTGCAG
AACGAAATCC GAAAGACCAT CAAAAGGAAA CGTGGCAATG AAAAATAA
 
Protein sequence
MLSPHLPGRS YASITHRAYL LGVKKSSKYM RDLGAANMQA GAERLGREFW EKPLGSLRHE 
QTRVLIKLGQ PDIWKGLHIH AWELVNGPVP NGHIVAAKDS NRKNISLDNL CLRTVSEHVV
RTCPNYQNLP NELVDVLHLQ NEIRKTIKRK RGNEK