Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_3946 |
Symbol | |
ID | 1185620 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 4455286 |
End bp | 4455753 |
Gene Length | 468 bp |
Protein Length | 155 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637395293 |
Product | hypothetical protein |
Protein accession | NP_793712 |
Protein GI | 28871093 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0442328 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCTGTCTC CCCATCTTCC AGGTCGGTCC TATGCATCGA TTACACACCG TGCGTACCTG CTGGGAGTGA AGAAAAGCAG CAAGTACATG CGCGACCTGG GCGCGGCCAA TATGCAAGCC GGCGCTGAGC GGCTCGGTCG GGAGTTTTGG GAGAAACCGC TGGGCTCGTT GCGACATGAG CAAACGAGGG TGCTGATCAA GCTTGGTCAG CCCGATATCT GGAAAGGCCT ACACATCCAC GCGTGGGAGT TGGTCAACGG GCCGGTGCCC AACGGCCACA TCGTCGCTGC CAAGGACAGT AACCGGAAGA ACATAAGCCT GGACAACCTG TGCCTTAGAA CGGTGAGCGA GCATGTAGTC CGCACCTGTC CCAACTATCA GAACCTGCCC AACGAACTCG TCGACGTCCT GCACCTGCAG AACGAAATCC GAAAGACCAT CAAAAGGAAA CGTGGCAATG AAAAATAA
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Protein sequence | MLSPHLPGRS YASITHRAYL LGVKKSSKYM RDLGAANMQA GAERLGREFW EKPLGSLRHE QTRVLIKLGQ PDIWKGLHIH AWELVNGPVP NGHIVAAKDS NRKNISLDNL CLRTVSEHVV RTCPNYQNLP NELVDVLHLQ NEIRKTIKRK RGNEK
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