Gene PSPTO_3908 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_3908 
Symbol 
ID1185581 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp4423209 
End bp4423733 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content57% 
IMG OID637395260 
Producthypothetical protein 
Protein accessionNP_793679 
Protein GI28871060 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGCGAA GTTATCTGCG ATTGGTCCTG TTCACAACGG GCCTGCTGTT CGGGGTACAG 
GTTCCCGGTT TCATCAGTGA TTACAGCAAG CGCGTCGAAG CGCACCTGAT CGAGGCGCAA
CAGGCGGTCA AAGGCTATAC CGCGACTGCG CAGCAGTTCT TCAAAGGCGA TATACAGGCG
TTGATCCAGC ACTATCGCAG CAGCGAAGAC CCTGTTTTTC GAGCTGATGC GGACAACATC
GATACGTTGA TGAACCGTAC TCATATTCTT GAGCGCCAGT GGCTCGGACT TCAAGGCCCT
TGGTATTCCA AGGCCCTGTA CGTCGCCACG TCTTCCGACC CGGATATTCG CCGTGAAACG
TTCAACGGCT ATACGTGGCA GGTGTTGCTG GCACCCGAGG TCATTGCCTG GGGCATTATC
AGTGCACTGC TGCTGGCACT GGTGATCGAA AGCTTTGTAC TGTTGCTCGG CTGGGTCGTT
CACGGCGGTC GGCGCAAGCC ACAGCTTGAG CGCGACTGGC GCTGA
 
Protein sequence
MLRSYLRLVL FTTGLLFGVQ VPGFISDYSK RVEAHLIEAQ QAVKGYTATA QQFFKGDIQA 
LIQHYRSSED PVFRADADNI DTLMNRTHIL ERQWLGLQGP WYSKALYVAT SSDPDIRRET
FNGYTWQVLL APEVIAWGII SALLLALVIE SFVLLLGWVV HGGRRKPQLE RDWR