Gene PSPTO_3888 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_3888 
Symbol 
ID1185559 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp4401047 
End bp4401388 
Gene Length342 bp 
Protein Length113 aa 
Translation table11 
GC content63% 
IMG OID637395238 
Producthypothetical protein 
Protein accessionNP_793659 
Protein GI28871040 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000176936 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATCTTC AAGTGATTTC TCGTGACGGG GAGCCTGAAT ATGCAGTGCT GCCGTGGGCC 
CAGTATCAGG CGTTGCTCAA GGCCGCCGGG CTGTCGGGCA AGCGGGGTGC ACAAGCGGCT
TCTGAGCCGC CCGGCAGCGC CGCCAGCGAA CTTCCAGGTT TTGACCAGTT GGGTGCCCTG
CGTGAGGCCA AAGGCCTTGA AGTGGCCAGT CTGGCCCGTA CCGTCGGCAT CAGCCCGTCC
TACCTGGAAC TGATCGAAAA CGGCACGCGT GAACCCGACG CTGCGATCAA ACGCAGCCTG
GCATGGGAGT TGGGCGTTGC GGGCTGGCGA GGTGAGTCGT GA
 
Protein sequence
MDLQVISRDG EPEYAVLPWA QYQALLKAAG LSGKRGAQAA SEPPGSAASE LPGFDQLGAL 
REAKGLEVAS LARTVGISPS YLELIENGTR EPDAAIKRSL AWELGVAGWR GES