| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_3845 |
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| Symbol | lpxK |
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| ID | 1185516 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 4352908 |
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| End bp | 4353903 |
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| Gene Length | 996 bp |
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| Protein Length | 331 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637395196 |
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| Product | tetraacyldisaccharide 4'-kinase |
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| Protein accession | NP_793617 |
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| Protein GI | 28870998 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1663] Tetraacyldisaccharide-1-P 4'-kinase |
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| TIGRFAM ID | [TIGR00682] tetraacyldisaccharide 4'-kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCACTTA CCGACCGCTT GCTTGATGCC TGGTACAAGG GCCACCCTGC GCTGACGCTG
CTGCGGCCAC TCGAAAGCCT TTATCGACGC GTCGTGGATG GCAAGCGGGC GAAATTTCTG
GCTGGCGAGG GCGATATCTA TCGGGCGCCG GTGCCGGTCA TCGTGGTGGG CAACATCACG
ATTGGCGGCA CCGGCAAGAC TCCGCTGATT CTGTGGATGA TCGAGCACTG TCAGCGTAAA
GGCCTGCGTG TCGGCGTGGT CAGTCGCGGC TACGGCGCCA AACCGCCAAG CCTGCCCTGG
CGCGTTCAGC CTGATCAAAG TGCCAGCGAA GCGGGTGACG AGCCGTTGCT CATCGTGCAG
CGCAGTGGCG TGCCGCTGAT GATCGACCCT GATCGCAGCC GCGCCGTACA GGCTTTGCTC
GCTGCCGAGC CGCTGGACCT GATTCTTTCC GACGATGGCC TGCAACATTA CCGCCTGGCC
CGTGACCTTG AGCTGGTACT GATCGATGCC GCCCGCGGCC TCGGCAATCG CCGCTGTTTG
CCGGCCGGCC CTCTGCGCGA ACCGGTCGAA CGTCTGAGCA GTGTCGATGC CTTGCTGTAC
AACGGTGCGA CGGCGGATCG CGATGACGGC TACGCCTTTA CGCTCAAGCC GTCGGCGCTG
ATCAACCTGC GCAGCGGCGA GCGCCAGCCG GTCAGCTATT TTCCGGCCGG ACAGGCGCTG
CACGCGGTCG CCGGAATCGG CAACCCTCAA CGTTTCTTCA ACACCCTCGA AGGACTACAC
TGGCGACCGG TGACTCATGC GTTCGCCGAC CATGCGCTCT ACAGTGTGCA GGCGCTGACG
TTCACACCCG CATTGCCCTT GGTCATGACC GAGAAGGATG CGGTGAAATG TCGTGCTTTC
GCAGCGGATG ACTGGTGGTA TCTGGCAGTC GATGCAGTAC CGTCCGATGC CTTTGTCGGC
TGGTTCGATG AGCAGTTGTT ACGTCTTTCT CCATGA
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| Protein sequence | MALTDRLLDA WYKGHPALTL LRPLESLYRR VVDGKRAKFL AGEGDIYRAP VPVIVVGNIT
IGGTGKTPLI LWMIEHCQRK GLRVGVVSRG YGAKPPSLPW RVQPDQSASE AGDEPLLIVQ
RSGVPLMIDP DRSRAVQALL AAEPLDLILS DDGLQHYRLA RDLELVLIDA ARGLGNRRCL
PAGPLREPVE RLSSVDALLY NGATADRDDG YAFTLKPSAL INLRSGERQP VSYFPAGQAL
HAVAGIGNPQ RFFNTLEGLH WRPVTHAFAD HALYSVQALT FTPALPLVMT EKDAVKCRAF
AADDWWYLAV DAVPSDAFVG WFDEQLLRLS P
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