| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_3829 |
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| Symbol | pabC |
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| ID | 1185500 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 4337017 |
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| End bp | 4337832 |
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| Gene Length | 816 bp |
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| Protein Length | 271 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637395181 |
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| Product | 4-amino-4-deoxychorismate lyase |
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| Protein accession | NP_793602 |
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| Protein GI | 28870983 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase |
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| TIGRFAM ID | [TIGR03461] aminodeoxychorismate lyase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0203451 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTCGCGT GGGTTGATGG CTGCTGCGCA GACACCCTGT CTGTCAAGGA CAGGGGGCTT
GCGTACGGTG ACGGAGTGTT TGAAACCGTC GCCGTCAAGG GCGGTCAGCC ATTGCTTCTT
GAGCGTCACT TGCAGCGTCT CGAAAACGGC TGTCAGCGCC TGGCAATTGC AATCGATCAG
GTGCTGGTCC GCACAGAAAT GACCCGTTTC GCTGCCGAAC TTGGCGACGG GGTCATGAAG
CTGATTCTCA CCCGTGGCGA CAGCCAGCGC GGTTATGCCC CGGCTCCCGA TACCCAATCA
CGTCGAATTC TACTGGGCAG CCCCGCGCCG GCTTACCCGG TTGCGCATGC CGAGCAGGGC
GTGCGCCTGT TTGCCTGCCA GACCCGTCTG GCCGAGCAGC CGCTGCTGGC CGGGCTCAAG
CACCTGAATC GCCTTGAACA AGTGCTGGCG CGTTCCGAAT GGAGCGACAG CGAACACGCC
GAGGGGTTGA TGTGCGACAC CTCCGGGCGG CTGATCGAAG GTGTTTACAG CAACCTGTTT
CTGGTCAGCG CCGGGCGCCT GTTGACCGCT GACCTGAGCC GTTGCGGGGT CGCAGGCGTG
ATGCGCGCCG AGTTGCTCGA TCAGGCACGA AACCTGGGTC TGGCTGTCGA TATCCGGGAC
GTGCACTTGT CCGACCTCGA AGCGGCGGAC GAAGTGTTTC TGTGCAACAG CGTCTACGGC
GTCTGGCCAG TGTGCAGGTT TGCAGCGCTG AACTGGCCGG TTGGTCCGCT CACCCGTAAA
CTGCAAGGCA TCGCTCGCGC CCTTCTGGAT ATCTGA
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| Protein sequence | MLAWVDGCCA DTLSVKDRGL AYGDGVFETV AVKGGQPLLL ERHLQRLENG CQRLAIAIDQ
VLVRTEMTRF AAELGDGVMK LILTRGDSQR GYAPAPDTQS RRILLGSPAP AYPVAHAEQG
VRLFACQTRL AEQPLLAGLK HLNRLEQVLA RSEWSDSEHA EGLMCDTSGR LIEGVYSNLF
LVSAGRLLTA DLSRCGVAGV MRAELLDQAR NLGLAVDIRD VHLSDLEAAD EVFLCNSVYG
VWPVCRFAAL NWPVGPLTRK LQGIARALLD I
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