| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_3825 |
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| Symbol | pilZ |
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| ID | 1185496 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 4333852 |
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| End bp | 4334208 |
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| Gene Length | 357 bp |
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| Protein Length | 118 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637395177 |
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| Product | type IV pilus biogenesis protein PilZ |
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| Protein accession | NP_793598 |
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| Protein GI | 28870979 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3215] Tfp pilus assembly protein PilZ |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0373515 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTTTGC CGCTGAGCAC AGGTCCACGT AATGGCATTC TGTCCCTGAC CATCAAGGAC
AAATCCGTGC TGTACGCCGC CTACATGCCG TTCATCAGAA ATGGCGGGCT GTTCATCCCC
ACCAGCAAGA GCTACAAGCT GGGCGACGAG GTGTTCATGC TGCTCAACCT GATGGACGAG
CCGGAGAAGG TTCCGGTAGC CGGGCGCGTA ACCTGGATCA CGCCCAAGGG TGCACAGGGC
AACCGCACTG CTGGCGTCGG CGTGCAGTTC AATGACGGCG ACAACACCGC ACGCAACCTG
ATCGAAACTC ACCTGGTCGG CGCTCTCAAG TCCGATCGTC CGACCCACAC GATGTAG
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| Protein sequence | MSLPLSTGPR NGILSLTIKD KSVLYAAYMP FIRNGGLFIP TSKSYKLGDE VFMLLNLMDE
PEKVPVAGRV TWITPKGAQG NRTAGVGVQF NDGDNTARNL IETHLVGALK SDRPTHTM
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