Gene PSPTO_3819 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_3819 
Symbolasd-2 
ID1185490 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand- 
Start bp4328873 
End bp4329886 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content60% 
IMG OID637395171 
Productaspartate-semialdehyde dehydrogenase 
Protein accessionNP_793592 
Protein GI28870973 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0136] Aspartate-semialdehyde dehydrogenase 
TIGRFAM ID[TIGR01296] aspartate-semialdehyde dehydrogenase (peptidoglycan organisms) 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.205266 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCAGT CCTTTGATAT CGCCGTAGTC GGCGCGACCG GCACTATCGG CGAAACCGTT 
GTTCAGGTTC TGGAGGAGCG TCATTTTCCG GTGGGCAATC TGCACTTGCT GGCGAGTATC 
GAATCAGCCG GCCATTCAGT GCCGTTTCGC GGCAAGAACG TGCGTGTGCG TGAAGTCGAT 
GCGTTCGATT TCAGCCAGGT CCGGCTGGCA TTTTTTGCCG CAGGCCCGGC CATCAGCCGC 
AGCTACGCTG AAAAGGCGAT CGCGGCAGGC TGCTCGGTGA TAGACCTCTC GGGCGCATTC 
CCGTCCGCAC AGGCTCCCAA TGTCGTGCCG GAAATCAATG CTACGCTTTT GAACACTTGC 
GGCGTCGCGC CCCACCTGGT TGCCAGCCCG AGTGCGTCTG CCACGGCGGT TGCGTTGGCG 
CTGGCCCCGT TGCGCGCGCT GCTCGATATT CAGTCTGTAG CGGTAACTGC CTGCCTGGCA 
GTGTCTGCAT TGGGGCGTGA AGGTGTCAGT GAGCTGGCGC GCCAGACCAC TGAACTGCTG 
AACGTGCGCC CGCTGGAAAC ACGCTTTTTT GATCGCCAGA TGGCCTTCAA CGTACTTGCC 
CAAGTGGGCA AGCCGGATGA GTCGGGTCAT TTGTCGCTGG AAAAACGCCT GGTTGACGAG 
TTGCGCGAAC TGTTGGCGCT GCCTTCGCTC AAAGTATCGG CCACCTGCAT TCAGGTGCCG 
GTTTTCTTCG GTGACAGTTT CACGGTAGCG CTGCGCACTG CCGGGCCGGT TGACGTGGTG 
GCAGTCAACG CCGCGCTTGA GTCTGCTGAC GGGATCGAGC TGGTCGATGC GGGTGATTAC 
CCGACGCCGG TTGGCGATGC AGTCGGTCAG GATGTGGTCT ACGTCGGGCG GGTCCGGGCC 
GGAACAGATG ATCCTGAGCA ACTCAATCTG TGGCTGACCT GCGACAACGT GCGCAAAGGC 
GCGGCGCTCA ATGCTGTGCA GGTTGGCGAA TTGTTGATAA AAGACTATGT GTAA
 
Protein sequence
MSQSFDIAVV GATGTIGETV VQVLEERHFP VGNLHLLASI ESAGHSVPFR GKNVRVREVD 
AFDFSQVRLA FFAAGPAISR SYAEKAIAAG CSVIDLSGAF PSAQAPNVVP EINATLLNTC 
GVAPHLVASP SASATAVALA LAPLRALLDI QSVAVTACLA VSALGREGVS ELARQTTELL 
NVRPLETRFF DRQMAFNVLA QVGKPDESGH LSLEKRLVDE LRELLALPSL KVSATCIQVP 
VFFGDSFTVA LRTAGPVDVV AVNAALESAD GIELVDAGDY PTPVGDAVGQ DVVYVGRVRA 
GTDDPEQLNL WLTCDNVRKG AALNAVQVGE LLIKDYV