Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_3812 |
Symbol | |
ID | 1185483 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 4320440 |
End bp | 4321027 |
Gene Length | 588 bp |
Protein Length | 195 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637395165 |
Product | cvpA family protein |
Protein accession | NP_793586 |
Protein GI | 28870967 |
COG category | [R] General function prediction only |
COG ID | [COG1286] Uncharacterized membrane protein, required for colicin V production |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCCATTTA CTCCGGTTGA CTGGGCAATT CTGGGAATTG TCGCCATCTC CGCCCTGATC AGTCTGAAAC GCGGCTTCGT AAAAGAAGCA CTGTCGTTGA CGACGTGGAT CATTGCAGGC GTAGTGGCCT GGATGTTTGG TGCAGGGCTG TCGCAGTATC TGGTCAATTA CATAGAAACA CCCTCGGCGC GCGTCATAGC GAGCTGCACC ATCCTTTTCG TCGCCACCCT GTTGGTGGGC GCCATGGTCA ATTTTCTGAT AGGCGAGCTG ATTCGCGTCA CTGGGCTTTC CGGGACCGAT CGCTTTCTGG GTATGGTCTT CGGCGCAGCG CGCGGAGGCC TGCTGGTCGT TGTAGCGGTA GGGCTATTGA GCCTGGGGCC GGTACAACAG GATCAATGGT GGCAGCAGTC CAGGCTGGTG CCGCAATTTC TCATCGTCGC TGACTGGTCG AAAAACCTGA TTCTCGGGAT GTCCAGCAAG TGGCTCGCCA GCGGCATCAG CGTACCCGCT GATCTGCCGT TCAAGGAACA GATCCTGCCG CCTACACTGC CGCAGGATGT GCTCGGTAAA TCCAGTTCCA CTAAGTAG
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Protein sequence | MPFTPVDWAI LGIVAISALI SLKRGFVKEA LSLTTWIIAG VVAWMFGAGL SQYLVNYIET PSARVIASCT ILFVATLLVG AMVNFLIGEL IRVTGLSGTD RFLGMVFGAA RGGLLVVVAV GLLSLGPVQQ DQWWQQSRLV PQFLIVADWS KNLILGMSSK WLASGISVPA DLPFKEQILP PTLPQDVLGK SSSTK
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