Gene PSPTO_3812 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_3812 
Symbol 
ID1185483 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp4320440 
End bp4321027 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content57% 
IMG OID637395165 
ProductcvpA family protein 
Protein accessionNP_793586 
Protein GI28870967 
COG category[R] General function prediction only 
COG ID[COG1286] Uncharacterized membrane protein, required for colicin V production 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCCATTTA CTCCGGTTGA CTGGGCAATT CTGGGAATTG TCGCCATCTC CGCCCTGATC 
AGTCTGAAAC GCGGCTTCGT AAAAGAAGCA CTGTCGTTGA CGACGTGGAT CATTGCAGGC
GTAGTGGCCT GGATGTTTGG TGCAGGGCTG TCGCAGTATC TGGTCAATTA CATAGAAACA
CCCTCGGCGC GCGTCATAGC GAGCTGCACC ATCCTTTTCG TCGCCACCCT GTTGGTGGGC
GCCATGGTCA ATTTTCTGAT AGGCGAGCTG ATTCGCGTCA CTGGGCTTTC CGGGACCGAT
CGCTTTCTGG GTATGGTCTT CGGCGCAGCG CGCGGAGGCC TGCTGGTCGT TGTAGCGGTA
GGGCTATTGA GCCTGGGGCC GGTACAACAG GATCAATGGT GGCAGCAGTC CAGGCTGGTG
CCGCAATTTC TCATCGTCGC TGACTGGTCG AAAAACCTGA TTCTCGGGAT GTCCAGCAAG
TGGCTCGCCA GCGGCATCAG CGTACCCGCT GATCTGCCGT TCAAGGAACA GATCCTGCCG
CCTACACTGC CGCAGGATGT GCTCGGTAAA TCCAGTTCCA CTAAGTAG
 
Protein sequence
MPFTPVDWAI LGIVAISALI SLKRGFVKEA LSLTTWIIAG VVAWMFGAGL SQYLVNYIET 
PSARVIASCT ILFVATLLVG AMVNFLIGEL IRVTGLSGTD RFLGMVFGAA RGGLLVVVAV
GLLSLGPVQQ DQWWQQSRLV PQFLIVADWS KNLILGMSSK WLASGISVPA DLPFKEQILP
PTLPQDVLGK SSSTK