| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_3786 |
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| Symbol | |
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| ID | 1185454 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 4288450 |
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| End bp | 4289157 |
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| Gene Length | 708 bp |
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| Protein Length | 235 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637395136 |
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| Product | PspA/IM30 family protein |
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| Protein accession | NP_793560 |
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| Protein GI | 28870941 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG1842] Phage shock protein A (IM30), suppresses sigma54-dependent transcription |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.634391 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTACAA GTATCTGGAA AAAACTGGTG ACCGCCGTTC GTGGTGGCGC TTCCGAAGTG
GGCGAGTCGA TTGCCGATGC CAATGCCATT CGCATTCTGG ATCAGGAAAT CCGTGACGCC
GACAACGCGC TGGTCAAGGC CCGCGACGGG CTGATCACCA TCAAGGCCAA GCACAAGCTC
TCGGCGCAGC GTCTTGAAGA ACACGCCACC AGCATTGCCA ACTGGGAAGG CCGCGCCATG
CAGGCCCTGA ACAAGGGCGA AGAAGCGCTG GCCGTTGAAT GTGCCAGCAA GATTGCCGAG
ATCGAAGCCC TGCGTGACCA GGAGCAGGAG CTGGCCGATC AGTTCGGCAA GCAGGTCAGC
CTGTTGCAGG AGCAGGTGAT CAAGGCCGAG TCGCGAATCA AGAGCCTCAA GCAACAGGTC
GAGATGGCCA AGGCCCGTGA AACTGTCCAG CGCGCCCGCG TTGCGACGGC CACTGCAACC
GGTGGCGCGA GTGGTTCGGT CGAGACTGCA GTGGGTTCGC TGGCGCGCCT CAAGCAGCGC
CAGGACGAAC AGGATGCCAA GCTGGAAGCG GCCGAAGAAC TGGCCAGCCA GTCCAGCGGC
AGTGACCTTG AGCGTCGTTT GCAGGACGCC GGTATTGGTG CCAAAAGCGG CGGCGCGCAA
GATGTGCTGG CACGCCTGAA AGCCAAAAAC CAGACGCCGG CGCAGTAA
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| Protein sequence | MTTSIWKKLV TAVRGGASEV GESIADANAI RILDQEIRDA DNALVKARDG LITIKAKHKL
SAQRLEEHAT SIANWEGRAM QALNKGEEAL AVECASKIAE IEALRDQEQE LADQFGKQVS
LLQEQVIKAE SRIKSLKQQV EMAKARETVQ RARVATATAT GGASGSVETA VGSLARLKQR
QDEQDAKLEA AEELASQSSG SDLERRLQDA GIGAKSGGAQ DVLARLKAKN QTPAQ
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