| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_3782 |
|---|
| Symbol | |
|---|
| ID | 1185450 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004578 |
|---|
| Strand | - |
|---|
| Start bp | 4285657 |
|---|
| End bp | 4286064 |
|---|
| Gene Length | 408 bp |
|---|
| Protein Length | 135 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637395132 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | NP_793556 |
|---|
| Protein GI | 28870937 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3766] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCGCTCA ATGCCACCGC TGTATTCGGC TTCGTTATGT ACATTCTGGT GGCGGCGATT
CTGTTCGCCC TGTTCCAGTT CATCTACAGC AGGATTACGC CGCACAAGGA GTTCGCGCTG
ATCCGCGAAA ACAACAGTGC CGCCGCGCTT GCGCTGGGCG GTTCACTGAT CGGTTTCGCG
TTGCCGGCCA GTAACATCAT CACCTACAGC ATCAGCATTC TGGACGTCAT CGTCTGGGTG
GTGATTGCCG CCGTGGTGCA GTTGTTGGCG TTCGGCGTCA CCAGCCTGGT GCTCAAGGGC
CTGTCGACGC GCATCGCCAA AGGCGAAATG GCCGCCGCTA TCTATTCGGC CAGCGTCGCA
ATCAGCGTCG GTCTTCTCAA CGCCGCCTGC ATGACCCCTT CGGTCTGA
|
|---|
| Protein sequence | MSLNATAVFG FVMYILVAAI LFALFQFIYS RITPHKEFAL IRENNSAAAL ALGGSLIGFA
LPASNIITYS ISILDVIVWV VIAAVVQLLA FGVTSLVLKG LSTRIAKGEM AAAIYSASVA
ISVGLLNAAC MTPSV
|
|---|
| |