| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_3719 |
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| Symbol | |
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| ID | 1185384 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 4198167 |
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| End bp | 4199186 |
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| Gene Length | 1020 bp |
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| Protein Length | 339 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637395066 |
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| Product | ABC transporter, permease protein |
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| Protein accession | NP_793493 |
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| Protein GI | 28870874 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4239] ABC-type uncharacterized transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGTTGT CTCCTCTCAA TCGCCGCCGT TTCGAACGTT TCAAAGCCAA TCGACGCGGC
TGGTGGTCTC TGTGGCTGTT CCTCATTTTG TTCGGCCTGA GCCTGGGCGC CGAGCTGATC
GCCAACGATA AACCGCTGGC CGTGCGCTAC GACGGCCAGT GGTATTTTCC GGTGATCGAG
CGTTACCCGG AAACCACCTT CGGCGGCGAA TTCCCGCTGG AAGCCAATTA CAAGAGCCCG
TACATCAAGG AGCTGCTGGC TGCGAAAGAT GGCTGGACCC TGTGGGCGCC GATCCCGTTC
AGTTACCAGA GCATCAATTA CGATCTGAAA GTACCCGCCC CTGCGCCACC GTCCCGGGAA
AACCTGCTGG GCACCGACGA TCAGGGCCGT GACGTGTTGG CGCGAGTGAT TTACGGCTTC
AGGATTTCCG TGCTGTTCGC CCTGACCCTG ACCATCCTCA GCTCGATCAT CGGTGTGATT
GCCGGTGCCT TGCAGGGCTA TTACGGCGGC TGGGTCGACT TGCTGGGCCA GCGCTTTCTG
GAGGTCTGGT CGGGCCTGCC TGTGCTGTAC CTGTTGATCA TCCTGGCCAG CTTTGTGCAG
CCCAACTTCT GGTGGCTGCT GGGTATCATG CTGCTGTTTT CCTGGATGGG CCTGGTGGAC
GTAGTGCGTG CCGAGTTCCT GCGCGGTCGC AACCTGGAGT ACGTGCGTGC GGCTCGGGCG
CTGGGCAGGG AAAACGGCGC AATCATGTTC CGCCACATTC TGCCCAACGC CATGGTCTCG
ACCATGACCT TCCTGCCGTT CATTCTCACT GGCGCCATCG GCACCCTGAC GGCACTGGAT
TTCCTAGGTT TCGGCCTGCC CGCCGGTTCA CCCTCGCTGG GCGAGCTGGT CGCACAGGGC
AAATCCAACC TGCAGGCACC CTGGCTGGGC ATCAGCGCGT TTGCGGTGCT GGCCATCATG
CTGAGCCTGC TGGTATTCAT CGGCGAATCC GCCCGCGATG CATTCGACCC AAGGAAATAA
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| Protein sequence | MKLSPLNRRR FERFKANRRG WWSLWLFLIL FGLSLGAELI ANDKPLAVRY DGQWYFPVIE
RYPETTFGGE FPLEANYKSP YIKELLAAKD GWTLWAPIPF SYQSINYDLK VPAPAPPSRE
NLLGTDDQGR DVLARVIYGF RISVLFALTL TILSSIIGVI AGALQGYYGG WVDLLGQRFL
EVWSGLPVLY LLIILASFVQ PNFWWLLGIM LLFSWMGLVD VVRAEFLRGR NLEYVRAARA
LGRENGAIMF RHILPNAMVS TMTFLPFILT GAIGTLTALD FLGFGLPAGS PSLGELVAQG
KSNLQAPWLG ISAFAVLAIM LSLLVFIGES ARDAFDPRK
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